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Robust dynamic community detection with applications to human brain functional networks
While current technology permits inference of dynamic brain networks over long time periods at high temporal resolution, the detailed structure of dynamic network communities during human seizures remains poorly understood. We introduce a new methodology that addresses critical aspects unique to the...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7275079/ https://www.ncbi.nlm.nih.gov/pubmed/32503997 http://dx.doi.org/10.1038/s41467-020-16285-7 |
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author | Martinet, L.-E. Kramer, M. A. Viles, W. Perkins, L. N. Spencer, E. Chu, C. J. Cash, S. S. Kolaczyk, E. D. |
author_facet | Martinet, L.-E. Kramer, M. A. Viles, W. Perkins, L. N. Spencer, E. Chu, C. J. Cash, S. S. Kolaczyk, E. D. |
author_sort | Martinet, L.-E. |
collection | PubMed |
description | While current technology permits inference of dynamic brain networks over long time periods at high temporal resolution, the detailed structure of dynamic network communities during human seizures remains poorly understood. We introduce a new methodology that addresses critical aspects unique to the analysis of dynamic functional networks inferred from noisy data. We propose a dynamic plex percolation method (DPPM) that is robust to edge noise, and yields well-defined spatiotemporal communities that span forward and backwards in time. We show in simulation that DPPM outperforms existing methods in accurately capturing certain stereotypical dynamic community behaviors in noisy situations. We then illustrate the ability of this method to track dynamic community organization during human seizures, using invasive brain voltage recordings at seizure onset. We conjecture that application of this method will yield new targets for surgical treatment of epilepsy, and more generally could provide new insights in other network neuroscience applications. |
format | Online Article Text |
id | pubmed-7275079 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-72750792020-06-16 Robust dynamic community detection with applications to human brain functional networks Martinet, L.-E. Kramer, M. A. Viles, W. Perkins, L. N. Spencer, E. Chu, C. J. Cash, S. S. Kolaczyk, E. D. Nat Commun Article While current technology permits inference of dynamic brain networks over long time periods at high temporal resolution, the detailed structure of dynamic network communities during human seizures remains poorly understood. We introduce a new methodology that addresses critical aspects unique to the analysis of dynamic functional networks inferred from noisy data. We propose a dynamic plex percolation method (DPPM) that is robust to edge noise, and yields well-defined spatiotemporal communities that span forward and backwards in time. We show in simulation that DPPM outperforms existing methods in accurately capturing certain stereotypical dynamic community behaviors in noisy situations. We then illustrate the ability of this method to track dynamic community organization during human seizures, using invasive brain voltage recordings at seizure onset. We conjecture that application of this method will yield new targets for surgical treatment of epilepsy, and more generally could provide new insights in other network neuroscience applications. Nature Publishing Group UK 2020-06-05 /pmc/articles/PMC7275079/ /pubmed/32503997 http://dx.doi.org/10.1038/s41467-020-16285-7 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Martinet, L.-E. Kramer, M. A. Viles, W. Perkins, L. N. Spencer, E. Chu, C. J. Cash, S. S. Kolaczyk, E. D. Robust dynamic community detection with applications to human brain functional networks |
title | Robust dynamic community detection with applications to human brain functional networks |
title_full | Robust dynamic community detection with applications to human brain functional networks |
title_fullStr | Robust dynamic community detection with applications to human brain functional networks |
title_full_unstemmed | Robust dynamic community detection with applications to human brain functional networks |
title_short | Robust dynamic community detection with applications to human brain functional networks |
title_sort | robust dynamic community detection with applications to human brain functional networks |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7275079/ https://www.ncbi.nlm.nih.gov/pubmed/32503997 http://dx.doi.org/10.1038/s41467-020-16285-7 |
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