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Evidence from ileum and liver transcriptomes of resistance to high-salt and water-deprivation conditions in camel

Camels have evolved various resistance characteristics adaptive to their desert habitats. In the present study, we used high-throughput sequencing to investigate stress-induced alternative splicing events as well as different genes involved in resistance to water deprivation and salt absorption in t...

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Autores principales: Zhang, Dong, Pan, Jing, Zhou, Huanmin, Cao, Yu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7275387/
https://www.ncbi.nlm.nih.gov/pubmed/32518679
http://dx.doi.org/10.1186/s40851-020-00159-3
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author Zhang, Dong
Pan, Jing
Zhou, Huanmin
Cao, Yu
author_facet Zhang, Dong
Pan, Jing
Zhou, Huanmin
Cao, Yu
author_sort Zhang, Dong
collection PubMed
description Camels have evolved various resistance characteristics adaptive to their desert habitats. In the present study, we used high-throughput sequencing to investigate stress-induced alternative splicing events as well as different genes involved in resistance to water deprivation and salt absorption in the ileum and liver in Camelus bactrianus. Through association analyses of mRNA, miRNA and lncRNA, we sought to explicate how camels respond to high salt and water scarcity conditions. There were two modes by which genes driven by alternative splicing were enriched to molecular functions, invoking of which was potentially fixed by organ and stress types. With qRT-PCR detection, the differentially expressed MUC6, AQP5, LOC105076960, PKP4, CDH11, TENM1, SDS, LOC105061856, PLIN2 and UPP2 were screened as functionally important genes, along with miR-29b, miR-484, miR-362-5p, miR-96, miR-195, miR-128 and miR-148a. These genes contributed to cellular stress resistance, for instance by reducing water loss, inhibiting excessive import of sodium, improving protective barriers and sodium ion homeostasis, and maintaining uridine content. The underlying competing endogenous RNAs referred to LNC001664, let-7e and LOC105076960 mRNA in ileum, and LNC001438, LNC003417, LNC001770, miR-199c and TENM1 mRNA in liver. Besides competent interpretation to resistance, there may be inspirations for curing human diseases triggered by high-salt intake.
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spelling pubmed-72753872020-06-08 Evidence from ileum and liver transcriptomes of resistance to high-salt and water-deprivation conditions in camel Zhang, Dong Pan, Jing Zhou, Huanmin Cao, Yu Zoological Lett Research Article Camels have evolved various resistance characteristics adaptive to their desert habitats. In the present study, we used high-throughput sequencing to investigate stress-induced alternative splicing events as well as different genes involved in resistance to water deprivation and salt absorption in the ileum and liver in Camelus bactrianus. Through association analyses of mRNA, miRNA and lncRNA, we sought to explicate how camels respond to high salt and water scarcity conditions. There were two modes by which genes driven by alternative splicing were enriched to molecular functions, invoking of which was potentially fixed by organ and stress types. With qRT-PCR detection, the differentially expressed MUC6, AQP5, LOC105076960, PKP4, CDH11, TENM1, SDS, LOC105061856, PLIN2 and UPP2 were screened as functionally important genes, along with miR-29b, miR-484, miR-362-5p, miR-96, miR-195, miR-128 and miR-148a. These genes contributed to cellular stress resistance, for instance by reducing water loss, inhibiting excessive import of sodium, improving protective barriers and sodium ion homeostasis, and maintaining uridine content. The underlying competing endogenous RNAs referred to LNC001664, let-7e and LOC105076960 mRNA in ileum, and LNC001438, LNC003417, LNC001770, miR-199c and TENM1 mRNA in liver. Besides competent interpretation to resistance, there may be inspirations for curing human diseases triggered by high-salt intake. BioMed Central 2020-06-05 /pmc/articles/PMC7275387/ /pubmed/32518679 http://dx.doi.org/10.1186/s40851-020-00159-3 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Article
Zhang, Dong
Pan, Jing
Zhou, Huanmin
Cao, Yu
Evidence from ileum and liver transcriptomes of resistance to high-salt and water-deprivation conditions in camel
title Evidence from ileum and liver transcriptomes of resistance to high-salt and water-deprivation conditions in camel
title_full Evidence from ileum and liver transcriptomes of resistance to high-salt and water-deprivation conditions in camel
title_fullStr Evidence from ileum and liver transcriptomes of resistance to high-salt and water-deprivation conditions in camel
title_full_unstemmed Evidence from ileum and liver transcriptomes of resistance to high-salt and water-deprivation conditions in camel
title_short Evidence from ileum and liver transcriptomes of resistance to high-salt and water-deprivation conditions in camel
title_sort evidence from ileum and liver transcriptomes of resistance to high-salt and water-deprivation conditions in camel
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7275387/
https://www.ncbi.nlm.nih.gov/pubmed/32518679
http://dx.doi.org/10.1186/s40851-020-00159-3
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