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Robust estimation of the effect of an exposure on the change in a continuous outcome
BACKGROUND: The change in two measurements of a continuous outcome can be modelled directly with a linear regression model, or indirectly with a random effects model (REM) of the individual measurements. These methods are susceptible to model misspecifications, which are commonly addressed by applyi...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7275496/ https://www.ncbi.nlm.nih.gov/pubmed/32505178 http://dx.doi.org/10.1186/s12874-020-01027-6 |
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author | Ning, Yilin Støer, Nathalie C. Ho, Peh Joo Kao, Shih Ling Ngiam, Kee Yuan Khoo, Eric Yin Hao Lee, Soo Chin Tai, E-Shyong Hartman, Mikael Reilly, Marie Tan, Chuen Seng |
author_facet | Ning, Yilin Støer, Nathalie C. Ho, Peh Joo Kao, Shih Ling Ngiam, Kee Yuan Khoo, Eric Yin Hao Lee, Soo Chin Tai, E-Shyong Hartman, Mikael Reilly, Marie Tan, Chuen Seng |
author_sort | Ning, Yilin |
collection | PubMed |
description | BACKGROUND: The change in two measurements of a continuous outcome can be modelled directly with a linear regression model, or indirectly with a random effects model (REM) of the individual measurements. These methods are susceptible to model misspecifications, which are commonly addressed by applying monotonic transformations (e.g., Box-Cox transformation) to the outcomes. However, transforming the outcomes complicates the data analysis, especially when variable selection is involved. We propose a robust alternative through a novel application of the conditional probit (cprobit) model. METHODS: The cprobit model analyzes the ordered outcomes within each subject, making the estimate invariant to monotonic transformation on the outcome. By scaling the estimate from the cprobit model, we obtain the exposure effect on the change in the observed or Box-Cox transformed outcome, pending the adequacy of the normality assumption on the raw or transformed scale. RESULTS: Using simulated data, we demonstrated a similar good performance of the cprobit model and REM with and without transformation, except for some bias from both methods when the Box-Cox transformation was applied to scenarios with small sample size and strong effects. Only the cprobit model was robust to skewed subject-specific intercept terms when a Box-Cox transformation was used. Using two real datasets from the breast cancer and inpatient glycemic variability studies which utilize electronic medical records, we illustrated the application of our proposed robust approach as a seamless three-step workflow that facilitates the use of Box-Cox transformation to address non-normality with a common underlying model. CONCLUSIONS: The cprobit model provides a seamless and robust inference on the change in continuous outcomes, and its three-step workflow is implemented in an R package for easy accessibility. |
format | Online Article Text |
id | pubmed-7275496 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-72754962020-06-08 Robust estimation of the effect of an exposure on the change in a continuous outcome Ning, Yilin Støer, Nathalie C. Ho, Peh Joo Kao, Shih Ling Ngiam, Kee Yuan Khoo, Eric Yin Hao Lee, Soo Chin Tai, E-Shyong Hartman, Mikael Reilly, Marie Tan, Chuen Seng BMC Med Res Methodol Research Article BACKGROUND: The change in two measurements of a continuous outcome can be modelled directly with a linear regression model, or indirectly with a random effects model (REM) of the individual measurements. These methods are susceptible to model misspecifications, which are commonly addressed by applying monotonic transformations (e.g., Box-Cox transformation) to the outcomes. However, transforming the outcomes complicates the data analysis, especially when variable selection is involved. We propose a robust alternative through a novel application of the conditional probit (cprobit) model. METHODS: The cprobit model analyzes the ordered outcomes within each subject, making the estimate invariant to monotonic transformation on the outcome. By scaling the estimate from the cprobit model, we obtain the exposure effect on the change in the observed or Box-Cox transformed outcome, pending the adequacy of the normality assumption on the raw or transformed scale. RESULTS: Using simulated data, we demonstrated a similar good performance of the cprobit model and REM with and without transformation, except for some bias from both methods when the Box-Cox transformation was applied to scenarios with small sample size and strong effects. Only the cprobit model was robust to skewed subject-specific intercept terms when a Box-Cox transformation was used. Using two real datasets from the breast cancer and inpatient glycemic variability studies which utilize electronic medical records, we illustrated the application of our proposed robust approach as a seamless three-step workflow that facilitates the use of Box-Cox transformation to address non-normality with a common underlying model. CONCLUSIONS: The cprobit model provides a seamless and robust inference on the change in continuous outcomes, and its three-step workflow is implemented in an R package for easy accessibility. BioMed Central 2020-06-06 /pmc/articles/PMC7275496/ /pubmed/32505178 http://dx.doi.org/10.1186/s12874-020-01027-6 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Ning, Yilin Støer, Nathalie C. Ho, Peh Joo Kao, Shih Ling Ngiam, Kee Yuan Khoo, Eric Yin Hao Lee, Soo Chin Tai, E-Shyong Hartman, Mikael Reilly, Marie Tan, Chuen Seng Robust estimation of the effect of an exposure on the change in a continuous outcome |
title | Robust estimation of the effect of an exposure on the change in a continuous outcome |
title_full | Robust estimation of the effect of an exposure on the change in a continuous outcome |
title_fullStr | Robust estimation of the effect of an exposure on the change in a continuous outcome |
title_full_unstemmed | Robust estimation of the effect of an exposure on the change in a continuous outcome |
title_short | Robust estimation of the effect of an exposure on the change in a continuous outcome |
title_sort | robust estimation of the effect of an exposure on the change in a continuous outcome |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7275496/ https://www.ncbi.nlm.nih.gov/pubmed/32505178 http://dx.doi.org/10.1186/s12874-020-01027-6 |
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