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An OpenData portal to share COVID-19 drug repurposing data in real time

The National Center for Advancing Translational Sciences (NCATS) has developed an online open science data portal for its COVID-19 drug repurposing campaign – named OpenData – with the goal of making data across a range of SARS-CoV-2 related assays available in real-time. The assays developed cover...

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Autores principales: Brimacombe, Kyle R., Zhao, Tongan, Eastman, Richard T., Hu, Xin, Wang, Ke, Backus, Mark, Baljinnyam, Bolormaa, Chen, Catherine Z., Chen, Lu, Eicher, Tara, Ferrer, Marc, Fu, Ying, Gorshkov, Kirill, Guo, Hui, Hanson, Quinlin M., Itkin, Zina, Kales, Stephen C., Klumpp-Thomas, Carleen, Lee, Emily M., Michael, Sam, Mierzwa, Tim, Patt, Andrew, Pradhan, Manisha, Renn, Alex, Shinn, Paul, Shrimp, Jonathan H., Viraktamath, Amit, Wilson, Kelli M., Xu, Miao, Zakharov, Alexey V., Zhu, Wei, Zheng, Wei, Simeonov, Anton, Mathé, Ewy A., Lo, Donald C., Hall, Matthew D., Shen, Min
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7276055/
https://www.ncbi.nlm.nih.gov/pubmed/32511420
http://dx.doi.org/10.1101/2020.06.04.135046
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author Brimacombe, Kyle R.
Zhao, Tongan
Eastman, Richard T.
Hu, Xin
Wang, Ke
Backus, Mark
Baljinnyam, Bolormaa
Chen, Catherine Z.
Chen, Lu
Eicher, Tara
Ferrer, Marc
Fu, Ying
Gorshkov, Kirill
Guo, Hui
Hanson, Quinlin M.
Itkin, Zina
Kales, Stephen C.
Klumpp-Thomas, Carleen
Lee, Emily M.
Michael, Sam
Mierzwa, Tim
Patt, Andrew
Pradhan, Manisha
Renn, Alex
Shinn, Paul
Shrimp, Jonathan H.
Viraktamath, Amit
Wilson, Kelli M.
Xu, Miao
Zakharov, Alexey V.
Zhu, Wei
Zheng, Wei
Simeonov, Anton
Mathé, Ewy A.
Lo, Donald C.
Hall, Matthew D.
Shen, Min
author_facet Brimacombe, Kyle R.
Zhao, Tongan
Eastman, Richard T.
Hu, Xin
Wang, Ke
Backus, Mark
Baljinnyam, Bolormaa
Chen, Catherine Z.
Chen, Lu
Eicher, Tara
Ferrer, Marc
Fu, Ying
Gorshkov, Kirill
Guo, Hui
Hanson, Quinlin M.
Itkin, Zina
Kales, Stephen C.
Klumpp-Thomas, Carleen
Lee, Emily M.
Michael, Sam
Mierzwa, Tim
Patt, Andrew
Pradhan, Manisha
Renn, Alex
Shinn, Paul
Shrimp, Jonathan H.
Viraktamath, Amit
Wilson, Kelli M.
Xu, Miao
Zakharov, Alexey V.
Zhu, Wei
Zheng, Wei
Simeonov, Anton
Mathé, Ewy A.
Lo, Donald C.
Hall, Matthew D.
Shen, Min
author_sort Brimacombe, Kyle R.
collection PubMed
description The National Center for Advancing Translational Sciences (NCATS) has developed an online open science data portal for its COVID-19 drug repurposing campaign – named OpenData – with the goal of making data across a range of SARS-CoV-2 related assays available in real-time. The assays developed cover a wide spectrum of the SARS-CoV-2 life cycle, including both viral and human (host) targets. In total, over 10,000 compounds are being tested in full concentration-response ranges from across multiple annotated small molecule libraries, including approved drug, repurposing candidates and experimental therapeutics designed to modulate a wide range of cellular targets. The goal is to support research scientists, clinical investigators and public health officials through open data sharing and analysis tools to expedite the development of SARS-CoV-2 interventions, and to prioritize promising compounds and repurposed drugs for further development in treating COVID-19.
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spelling pubmed-72760552020-06-07 An OpenData portal to share COVID-19 drug repurposing data in real time Brimacombe, Kyle R. Zhao, Tongan Eastman, Richard T. Hu, Xin Wang, Ke Backus, Mark Baljinnyam, Bolormaa Chen, Catherine Z. Chen, Lu Eicher, Tara Ferrer, Marc Fu, Ying Gorshkov, Kirill Guo, Hui Hanson, Quinlin M. Itkin, Zina Kales, Stephen C. Klumpp-Thomas, Carleen Lee, Emily M. Michael, Sam Mierzwa, Tim Patt, Andrew Pradhan, Manisha Renn, Alex Shinn, Paul Shrimp, Jonathan H. Viraktamath, Amit Wilson, Kelli M. Xu, Miao Zakharov, Alexey V. Zhu, Wei Zheng, Wei Simeonov, Anton Mathé, Ewy A. Lo, Donald C. Hall, Matthew D. Shen, Min bioRxiv Article The National Center for Advancing Translational Sciences (NCATS) has developed an online open science data portal for its COVID-19 drug repurposing campaign – named OpenData – with the goal of making data across a range of SARS-CoV-2 related assays available in real-time. The assays developed cover a wide spectrum of the SARS-CoV-2 life cycle, including both viral and human (host) targets. In total, over 10,000 compounds are being tested in full concentration-response ranges from across multiple annotated small molecule libraries, including approved drug, repurposing candidates and experimental therapeutics designed to modulate a wide range of cellular targets. The goal is to support research scientists, clinical investigators and public health officials through open data sharing and analysis tools to expedite the development of SARS-CoV-2 interventions, and to prioritize promising compounds and repurposed drugs for further development in treating COVID-19. Cold Spring Harbor Laboratory 2020-06-05 /pmc/articles/PMC7276055/ /pubmed/32511420 http://dx.doi.org/10.1101/2020.06.04.135046 Text en http://creativecommons.org/licenses/by-nc-nd/4.0/It is made available under a CC-BY-NC-ND 4.0 International license (http://creativecommons.org/licenses/by-nc-nd/4.0/) .
spellingShingle Article
Brimacombe, Kyle R.
Zhao, Tongan
Eastman, Richard T.
Hu, Xin
Wang, Ke
Backus, Mark
Baljinnyam, Bolormaa
Chen, Catherine Z.
Chen, Lu
Eicher, Tara
Ferrer, Marc
Fu, Ying
Gorshkov, Kirill
Guo, Hui
Hanson, Quinlin M.
Itkin, Zina
Kales, Stephen C.
Klumpp-Thomas, Carleen
Lee, Emily M.
Michael, Sam
Mierzwa, Tim
Patt, Andrew
Pradhan, Manisha
Renn, Alex
Shinn, Paul
Shrimp, Jonathan H.
Viraktamath, Amit
Wilson, Kelli M.
Xu, Miao
Zakharov, Alexey V.
Zhu, Wei
Zheng, Wei
Simeonov, Anton
Mathé, Ewy A.
Lo, Donald C.
Hall, Matthew D.
Shen, Min
An OpenData portal to share COVID-19 drug repurposing data in real time
title An OpenData portal to share COVID-19 drug repurposing data in real time
title_full An OpenData portal to share COVID-19 drug repurposing data in real time
title_fullStr An OpenData portal to share COVID-19 drug repurposing data in real time
title_full_unstemmed An OpenData portal to share COVID-19 drug repurposing data in real time
title_short An OpenData portal to share COVID-19 drug repurposing data in real time
title_sort opendata portal to share covid-19 drug repurposing data in real time
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7276055/
https://www.ncbi.nlm.nih.gov/pubmed/32511420
http://dx.doi.org/10.1101/2020.06.04.135046
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