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Optimum Threshold Minimizes Noise in Timing of Intracellular Events

How the noisy expression of regulatory proteins affects timing of intracellular events is an intriguing fundamental problem that influences diverse cellular processes. Here we use the bacteriophage λ to study event timing in individual cells where cell lysis is the result of expression and accumulat...

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Autores principales: Kannoly, Sherin, Gao, Tianhui, Dey, Supravat, Wang, Ing-Nang, Singh, Abhyudai, Dennehy, John J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7276437/
https://www.ncbi.nlm.nih.gov/pubmed/32504874
http://dx.doi.org/10.1016/j.isci.2020.101186
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author Kannoly, Sherin
Gao, Tianhui
Dey, Supravat
Wang, Ing-Nang
Singh, Abhyudai
Dennehy, John J.
author_facet Kannoly, Sherin
Gao, Tianhui
Dey, Supravat
Wang, Ing-Nang
Singh, Abhyudai
Dennehy, John J.
author_sort Kannoly, Sherin
collection PubMed
description How the noisy expression of regulatory proteins affects timing of intracellular events is an intriguing fundamental problem that influences diverse cellular processes. Here we use the bacteriophage λ to study event timing in individual cells where cell lysis is the result of expression and accumulation of a single protein (holin) in the Escherichia coli cell membrane up to a critical threshold level. Site-directed mutagenesis of the holin gene generated phage variants that vary in their lysis times from 30 to 190 min. Observation of the lysis times of single cells reveals an intriguing finding—the noise in lysis timing first decreases with increasing lysis time to reach a minimum and then sharply increases at longer lysis times. A mathematical model with stochastic expression of holin together with dilution from cell growth was sufficient to explain the non-monotonic noise profile and identify holin accumulation thresholds that generate precision in lysis timing.
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spelling pubmed-72764372020-06-10 Optimum Threshold Minimizes Noise in Timing of Intracellular Events Kannoly, Sherin Gao, Tianhui Dey, Supravat Wang, Ing-Nang Singh, Abhyudai Dennehy, John J. iScience Article How the noisy expression of regulatory proteins affects timing of intracellular events is an intriguing fundamental problem that influences diverse cellular processes. Here we use the bacteriophage λ to study event timing in individual cells where cell lysis is the result of expression and accumulation of a single protein (holin) in the Escherichia coli cell membrane up to a critical threshold level. Site-directed mutagenesis of the holin gene generated phage variants that vary in their lysis times from 30 to 190 min. Observation of the lysis times of single cells reveals an intriguing finding—the noise in lysis timing first decreases with increasing lysis time to reach a minimum and then sharply increases at longer lysis times. A mathematical model with stochastic expression of holin together with dilution from cell growth was sufficient to explain the non-monotonic noise profile and identify holin accumulation thresholds that generate precision in lysis timing. Elsevier 2020-05-21 /pmc/articles/PMC7276437/ /pubmed/32504874 http://dx.doi.org/10.1016/j.isci.2020.101186 Text en © 2020 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Kannoly, Sherin
Gao, Tianhui
Dey, Supravat
Wang, Ing-Nang
Singh, Abhyudai
Dennehy, John J.
Optimum Threshold Minimizes Noise in Timing of Intracellular Events
title Optimum Threshold Minimizes Noise in Timing of Intracellular Events
title_full Optimum Threshold Minimizes Noise in Timing of Intracellular Events
title_fullStr Optimum Threshold Minimizes Noise in Timing of Intracellular Events
title_full_unstemmed Optimum Threshold Minimizes Noise in Timing of Intracellular Events
title_short Optimum Threshold Minimizes Noise in Timing of Intracellular Events
title_sort optimum threshold minimizes noise in timing of intracellular events
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7276437/
https://www.ncbi.nlm.nih.gov/pubmed/32504874
http://dx.doi.org/10.1016/j.isci.2020.101186
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