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Optimum Threshold Minimizes Noise in Timing of Intracellular Events
How the noisy expression of regulatory proteins affects timing of intracellular events is an intriguing fundamental problem that influences diverse cellular processes. Here we use the bacteriophage λ to study event timing in individual cells where cell lysis is the result of expression and accumulat...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7276437/ https://www.ncbi.nlm.nih.gov/pubmed/32504874 http://dx.doi.org/10.1016/j.isci.2020.101186 |
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author | Kannoly, Sherin Gao, Tianhui Dey, Supravat Wang, Ing-Nang Singh, Abhyudai Dennehy, John J. |
author_facet | Kannoly, Sherin Gao, Tianhui Dey, Supravat Wang, Ing-Nang Singh, Abhyudai Dennehy, John J. |
author_sort | Kannoly, Sherin |
collection | PubMed |
description | How the noisy expression of regulatory proteins affects timing of intracellular events is an intriguing fundamental problem that influences diverse cellular processes. Here we use the bacteriophage λ to study event timing in individual cells where cell lysis is the result of expression and accumulation of a single protein (holin) in the Escherichia coli cell membrane up to a critical threshold level. Site-directed mutagenesis of the holin gene generated phage variants that vary in their lysis times from 30 to 190 min. Observation of the lysis times of single cells reveals an intriguing finding—the noise in lysis timing first decreases with increasing lysis time to reach a minimum and then sharply increases at longer lysis times. A mathematical model with stochastic expression of holin together with dilution from cell growth was sufficient to explain the non-monotonic noise profile and identify holin accumulation thresholds that generate precision in lysis timing. |
format | Online Article Text |
id | pubmed-7276437 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-72764372020-06-10 Optimum Threshold Minimizes Noise in Timing of Intracellular Events Kannoly, Sherin Gao, Tianhui Dey, Supravat Wang, Ing-Nang Singh, Abhyudai Dennehy, John J. iScience Article How the noisy expression of regulatory proteins affects timing of intracellular events is an intriguing fundamental problem that influences diverse cellular processes. Here we use the bacteriophage λ to study event timing in individual cells where cell lysis is the result of expression and accumulation of a single protein (holin) in the Escherichia coli cell membrane up to a critical threshold level. Site-directed mutagenesis of the holin gene generated phage variants that vary in their lysis times from 30 to 190 min. Observation of the lysis times of single cells reveals an intriguing finding—the noise in lysis timing first decreases with increasing lysis time to reach a minimum and then sharply increases at longer lysis times. A mathematical model with stochastic expression of holin together with dilution from cell growth was sufficient to explain the non-monotonic noise profile and identify holin accumulation thresholds that generate precision in lysis timing. Elsevier 2020-05-21 /pmc/articles/PMC7276437/ /pubmed/32504874 http://dx.doi.org/10.1016/j.isci.2020.101186 Text en © 2020 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Article Kannoly, Sherin Gao, Tianhui Dey, Supravat Wang, Ing-Nang Singh, Abhyudai Dennehy, John J. Optimum Threshold Minimizes Noise in Timing of Intracellular Events |
title | Optimum Threshold Minimizes Noise in Timing of Intracellular Events |
title_full | Optimum Threshold Minimizes Noise in Timing of Intracellular Events |
title_fullStr | Optimum Threshold Minimizes Noise in Timing of Intracellular Events |
title_full_unstemmed | Optimum Threshold Minimizes Noise in Timing of Intracellular Events |
title_short | Optimum Threshold Minimizes Noise in Timing of Intracellular Events |
title_sort | optimum threshold minimizes noise in timing of intracellular events |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7276437/ https://www.ncbi.nlm.nih.gov/pubmed/32504874 http://dx.doi.org/10.1016/j.isci.2020.101186 |
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