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Deep learning–based fully automated detection and segmentation of lymph nodes on multiparametric-mri for rectal cancer: A multicentre study

BACKGROUND: Accurate lymph nodes (LNs) assessment is important for rectal cancer (RC) staging in multiparametric magnetic resonance imaging (mpMRI). However, it is incredibly time-consumming to identify all the LNs in scan region. This study aims to develop and validate a deep-learning-based, fully-...

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Autores principales: Zhao, Xingyu, Xie, Peiyi, Wang, Mengmeng, Li, Wenru, Pickhardt, Perry J., Xia, Wei, Xiong, Fei, Zhang, Rui, Xie, Yao, Jian, Junming, Bai, Honglin, Ni, Caifang, Gu, Jinhui, Yu, Tao, Tang, Yuguo, Gao, Xin, Meng, Xiaochun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7276514/
https://www.ncbi.nlm.nih.gov/pubmed/32512507
http://dx.doi.org/10.1016/j.ebiom.2020.102780
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author Zhao, Xingyu
Xie, Peiyi
Wang, Mengmeng
Li, Wenru
Pickhardt, Perry J.
Xia, Wei
Xiong, Fei
Zhang, Rui
Xie, Yao
Jian, Junming
Bai, Honglin
Ni, Caifang
Gu, Jinhui
Yu, Tao
Tang, Yuguo
Gao, Xin
Meng, Xiaochun
author_facet Zhao, Xingyu
Xie, Peiyi
Wang, Mengmeng
Li, Wenru
Pickhardt, Perry J.
Xia, Wei
Xiong, Fei
Zhang, Rui
Xie, Yao
Jian, Junming
Bai, Honglin
Ni, Caifang
Gu, Jinhui
Yu, Tao
Tang, Yuguo
Gao, Xin
Meng, Xiaochun
author_sort Zhao, Xingyu
collection PubMed
description BACKGROUND: Accurate lymph nodes (LNs) assessment is important for rectal cancer (RC) staging in multiparametric magnetic resonance imaging (mpMRI). However, it is incredibly time-consumming to identify all the LNs in scan region. This study aims to develop and validate a deep-learning-based, fully-automated lymph node detection and segmentation (auto-LNDS) model based on mpMRI. METHODS: In total, 5789 annotated LNs (diameter ≥ 3 mm) in mpMRI from 293 patients with RC in a single center were enrolled. Fused T2-weighted images (T2WI) and diffusion-weighted images (DWI) provided input for the deep learning framework Mask R-CNN through transfer learning to generate the auto-LNDS model. The model was then validated both on the internal and external datasets consisting of 935 LNs and 1198 LNs, respectively. The performance for LNs detection was evaluated using sensitivity, positive predictive value (PPV), and false positive rate per case (FP/vol), and segmentation performance was evaluated using the Dice similarity coefficient (DSC). FINDINGS: For LNs detection, auto-LNDS achieved sensitivity, PPV, and FP/vol of 80.0%, 73.5% and 8.6 in internal testing, and 62.6%, 64.5%, and 8.2 in external testing, respectively, significantly better than the performance of junior radiologists. The time taken for model detection and segmentation was 1.3 s/case, compared with 200 s/case for the radiologists. For LNs segmentation, the DSC of the model was in the range of 0.81–0.82. INTERPRETATION: This deep learning–based auto-LNDS model can achieve pelvic LNseffectively based on mpMRI for RC, and holds great potential for facilitating N-staging in clinical practice.
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spelling pubmed-72765142020-06-10 Deep learning–based fully automated detection and segmentation of lymph nodes on multiparametric-mri for rectal cancer: A multicentre study Zhao, Xingyu Xie, Peiyi Wang, Mengmeng Li, Wenru Pickhardt, Perry J. Xia, Wei Xiong, Fei Zhang, Rui Xie, Yao Jian, Junming Bai, Honglin Ni, Caifang Gu, Jinhui Yu, Tao Tang, Yuguo Gao, Xin Meng, Xiaochun EBioMedicine Research paper BACKGROUND: Accurate lymph nodes (LNs) assessment is important for rectal cancer (RC) staging in multiparametric magnetic resonance imaging (mpMRI). However, it is incredibly time-consumming to identify all the LNs in scan region. This study aims to develop and validate a deep-learning-based, fully-automated lymph node detection and segmentation (auto-LNDS) model based on mpMRI. METHODS: In total, 5789 annotated LNs (diameter ≥ 3 mm) in mpMRI from 293 patients with RC in a single center were enrolled. Fused T2-weighted images (T2WI) and diffusion-weighted images (DWI) provided input for the deep learning framework Mask R-CNN through transfer learning to generate the auto-LNDS model. The model was then validated both on the internal and external datasets consisting of 935 LNs and 1198 LNs, respectively. The performance for LNs detection was evaluated using sensitivity, positive predictive value (PPV), and false positive rate per case (FP/vol), and segmentation performance was evaluated using the Dice similarity coefficient (DSC). FINDINGS: For LNs detection, auto-LNDS achieved sensitivity, PPV, and FP/vol of 80.0%, 73.5% and 8.6 in internal testing, and 62.6%, 64.5%, and 8.2 in external testing, respectively, significantly better than the performance of junior radiologists. The time taken for model detection and segmentation was 1.3 s/case, compared with 200 s/case for the radiologists. For LNs segmentation, the DSC of the model was in the range of 0.81–0.82. INTERPRETATION: This deep learning–based auto-LNDS model can achieve pelvic LNseffectively based on mpMRI for RC, and holds great potential for facilitating N-staging in clinical practice. Elsevier 2020-06-05 /pmc/articles/PMC7276514/ /pubmed/32512507 http://dx.doi.org/10.1016/j.ebiom.2020.102780 Text en © 2020 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research paper
Zhao, Xingyu
Xie, Peiyi
Wang, Mengmeng
Li, Wenru
Pickhardt, Perry J.
Xia, Wei
Xiong, Fei
Zhang, Rui
Xie, Yao
Jian, Junming
Bai, Honglin
Ni, Caifang
Gu, Jinhui
Yu, Tao
Tang, Yuguo
Gao, Xin
Meng, Xiaochun
Deep learning–based fully automated detection and segmentation of lymph nodes on multiparametric-mri for rectal cancer: A multicentre study
title Deep learning–based fully automated detection and segmentation of lymph nodes on multiparametric-mri for rectal cancer: A multicentre study
title_full Deep learning–based fully automated detection and segmentation of lymph nodes on multiparametric-mri for rectal cancer: A multicentre study
title_fullStr Deep learning–based fully automated detection and segmentation of lymph nodes on multiparametric-mri for rectal cancer: A multicentre study
title_full_unstemmed Deep learning–based fully automated detection and segmentation of lymph nodes on multiparametric-mri for rectal cancer: A multicentre study
title_short Deep learning–based fully automated detection and segmentation of lymph nodes on multiparametric-mri for rectal cancer: A multicentre study
title_sort deep learning–based fully automated detection and segmentation of lymph nodes on multiparametric-mri for rectal cancer: a multicentre study
topic Research paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7276514/
https://www.ncbi.nlm.nih.gov/pubmed/32512507
http://dx.doi.org/10.1016/j.ebiom.2020.102780
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