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Single Nucleotide and Copy-Number Variants in IL4 and IL13 Are Not Associated with Asthma Susceptibility or Inflammatory Markers: A Case-Control Study in a Mexican-Mestizo Population

Background: Asthma is a complex and chronic inflammatory airway disease. Asthma’s etiology is unknown; however, genetic and environmental factors could affect disease susceptibility. We designed a case-control study aimed to evaluate the role of single-nucleotide polymorphisms (SNP), and copy-number...

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Autores principales: Ambrocio-Ortiz, Enrique, Galicia-Negrete, Gustavo, Pérez-Rubio, Gloria, Escobar-Morales, Areli J., Abarca-Rojano, Edgar, Del Angel-Pablo, Alma D., Castillejos-López, Manuel D. J., Falfán-Valencia, Ramcés
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
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Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7277638/
https://www.ncbi.nlm.nih.gov/pubmed/32366038
http://dx.doi.org/10.3390/diagnostics10050273
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author Ambrocio-Ortiz, Enrique
Galicia-Negrete, Gustavo
Pérez-Rubio, Gloria
Escobar-Morales, Areli J.
Abarca-Rojano, Edgar
Del Angel-Pablo, Alma D.
Castillejos-López, Manuel D. J.
Falfán-Valencia, Ramcés
author_facet Ambrocio-Ortiz, Enrique
Galicia-Negrete, Gustavo
Pérez-Rubio, Gloria
Escobar-Morales, Areli J.
Abarca-Rojano, Edgar
Del Angel-Pablo, Alma D.
Castillejos-López, Manuel D. J.
Falfán-Valencia, Ramcés
author_sort Ambrocio-Ortiz, Enrique
collection PubMed
description Background: Asthma is a complex and chronic inflammatory airway disease. Asthma’s etiology is unknown; however, genetic and environmental factors could affect disease susceptibility. We designed a case-control study aimed to evaluate the role of single-nucleotide polymorphisms (SNP), and copy-number variants (CNV) in the IL4 and IL13 genes in asthma susceptibility and their participation in plasma cytokine levels depending on genotypes Methods: We include 486 subjects, divided into asthma patients (AP, n = 141) and clinically healthy subjects (CHS, n = 345). We genotyped three SNP, two in the IL4 and two in the IL13 gene; also, two CNVs in IL4. The IL-4, IL-13 and IgE plasma levels were quantified. Results: Biomass-burning smoke exposure was higher in the AP group compared to CHS (47.5% vs. 20.9%; p < 0.01, OR = 3.4). No statistical differences were found in the genetic association analysis. In both CNV, we only found the common allele. For the analysis of IL-4, IL-13, and IgE measures stratified by genotypes, no significant association or correlation was found. Conclusion: In the Mexican-mestizo population, SNPs neither CNVs in IL4 nor IL13 are associated with asthma susceptibility or involved serum cytokine levels. Biomass-burning smoke is a risk factor in asthma susceptibility.
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spelling pubmed-72776382020-06-12 Single Nucleotide and Copy-Number Variants in IL4 and IL13 Are Not Associated with Asthma Susceptibility or Inflammatory Markers: A Case-Control Study in a Mexican-Mestizo Population Ambrocio-Ortiz, Enrique Galicia-Negrete, Gustavo Pérez-Rubio, Gloria Escobar-Morales, Areli J. Abarca-Rojano, Edgar Del Angel-Pablo, Alma D. Castillejos-López, Manuel D. J. Falfán-Valencia, Ramcés Diagnostics (Basel) Article Background: Asthma is a complex and chronic inflammatory airway disease. Asthma’s etiology is unknown; however, genetic and environmental factors could affect disease susceptibility. We designed a case-control study aimed to evaluate the role of single-nucleotide polymorphisms (SNP), and copy-number variants (CNV) in the IL4 and IL13 genes in asthma susceptibility and their participation in plasma cytokine levels depending on genotypes Methods: We include 486 subjects, divided into asthma patients (AP, n = 141) and clinically healthy subjects (CHS, n = 345). We genotyped three SNP, two in the IL4 and two in the IL13 gene; also, two CNVs in IL4. The IL-4, IL-13 and IgE plasma levels were quantified. Results: Biomass-burning smoke exposure was higher in the AP group compared to CHS (47.5% vs. 20.9%; p < 0.01, OR = 3.4). No statistical differences were found in the genetic association analysis. In both CNV, we only found the common allele. For the analysis of IL-4, IL-13, and IgE measures stratified by genotypes, no significant association or correlation was found. Conclusion: In the Mexican-mestizo population, SNPs neither CNVs in IL4 nor IL13 are associated with asthma susceptibility or involved serum cytokine levels. Biomass-burning smoke is a risk factor in asthma susceptibility. MDPI 2020-04-30 /pmc/articles/PMC7277638/ /pubmed/32366038 http://dx.doi.org/10.3390/diagnostics10050273 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ambrocio-Ortiz, Enrique
Galicia-Negrete, Gustavo
Pérez-Rubio, Gloria
Escobar-Morales, Areli J.
Abarca-Rojano, Edgar
Del Angel-Pablo, Alma D.
Castillejos-López, Manuel D. J.
Falfán-Valencia, Ramcés
Single Nucleotide and Copy-Number Variants in IL4 and IL13 Are Not Associated with Asthma Susceptibility or Inflammatory Markers: A Case-Control Study in a Mexican-Mestizo Population
title Single Nucleotide and Copy-Number Variants in IL4 and IL13 Are Not Associated with Asthma Susceptibility or Inflammatory Markers: A Case-Control Study in a Mexican-Mestizo Population
title_full Single Nucleotide and Copy-Number Variants in IL4 and IL13 Are Not Associated with Asthma Susceptibility or Inflammatory Markers: A Case-Control Study in a Mexican-Mestizo Population
title_fullStr Single Nucleotide and Copy-Number Variants in IL4 and IL13 Are Not Associated with Asthma Susceptibility or Inflammatory Markers: A Case-Control Study in a Mexican-Mestizo Population
title_full_unstemmed Single Nucleotide and Copy-Number Variants in IL4 and IL13 Are Not Associated with Asthma Susceptibility or Inflammatory Markers: A Case-Control Study in a Mexican-Mestizo Population
title_short Single Nucleotide and Copy-Number Variants in IL4 and IL13 Are Not Associated with Asthma Susceptibility or Inflammatory Markers: A Case-Control Study in a Mexican-Mestizo Population
title_sort single nucleotide and copy-number variants in il4 and il13 are not associated with asthma susceptibility or inflammatory markers: a case-control study in a mexican-mestizo population
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7277638/
https://www.ncbi.nlm.nih.gov/pubmed/32366038
http://dx.doi.org/10.3390/diagnostics10050273
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