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Hydrogen bonding in the crystal structure of phurcalite, Ca(2)[(UO(2))(3)O(2)(PO(4))(2)]·7H(2)O: single-crystal X-ray study and TORQUE calculations

The crystal structure of phurcalite, Ca(2)[(UO(2))(3)O(2)(PO(4))(2)]·7H(2)O, orthorhombic, a = 17.3785 (9) Å, b = 15.9864 (8) Å, c = 13.5477 (10) Å, V = 3763.8 (4) Å(3), space group Pbca, Z = 8 has been refined from single-crystal XRD data to R = 0.042 for 3182 unique [I > 3σ(I)] reflections and...

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Autores principales: Plášil, Jakub, Kiefer, Boris, Ghazisaeed, Seyedat, Philippo, Simon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7278090/
https://www.ncbi.nlm.nih.gov/pubmed/32831267
http://dx.doi.org/10.1107/S2052520620005739
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author Plášil, Jakub
Kiefer, Boris
Ghazisaeed, Seyedat
Philippo, Simon
author_facet Plášil, Jakub
Kiefer, Boris
Ghazisaeed, Seyedat
Philippo, Simon
author_sort Plášil, Jakub
collection PubMed
description The crystal structure of phurcalite, Ca(2)[(UO(2))(3)O(2)(PO(4))(2)]·7H(2)O, orthorhombic, a = 17.3785 (9) Å, b = 15.9864 (8) Å, c = 13.5477 (10) Å, V = 3763.8 (4) Å(3), space group Pbca, Z = 8 has been refined from single-crystal XRD data to R = 0.042 for 3182 unique [I > 3σ(I)] reflections and the hydrogen-bonding scheme has been refined by theoretical calculations based on the TORQUE method. The phurcalite structure is layered, with uranyl phosphate sheets of the phosphuranylite topology which are linked by extensive hydrogen bonds across the interlayer occupied by Ca(2+) cations and H(2)O groups. In contrast to previous studies the approach here reveals five transformer H(2)O groups (compared to three expected by a previous study) and two non-transformer H(2)O groups. One of the transformer H(2)O groups is, nevertheless, not linked to any metal cation, which is a less frequent type of H(2)O bonding in solid state compounds and minerals. The structural formula of phurcalite has been therefore redefined as {Ca(2)(H(2) ([3])O)(5)(H(2) ([4])O)(2)}[(UO(2))(3)O(2)(PO(4))(2)], Z = 8.
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spelling pubmed-72780902020-06-25 Hydrogen bonding in the crystal structure of phurcalite, Ca(2)[(UO(2))(3)O(2)(PO(4))(2)]·7H(2)O: single-crystal X-ray study and TORQUE calculations Plášil, Jakub Kiefer, Boris Ghazisaeed, Seyedat Philippo, Simon Acta Crystallogr B Struct Sci Cryst Eng Mater Research Papers The crystal structure of phurcalite, Ca(2)[(UO(2))(3)O(2)(PO(4))(2)]·7H(2)O, orthorhombic, a = 17.3785 (9) Å, b = 15.9864 (8) Å, c = 13.5477 (10) Å, V = 3763.8 (4) Å(3), space group Pbca, Z = 8 has been refined from single-crystal XRD data to R = 0.042 for 3182 unique [I > 3σ(I)] reflections and the hydrogen-bonding scheme has been refined by theoretical calculations based on the TORQUE method. The phurcalite structure is layered, with uranyl phosphate sheets of the phosphuranylite topology which are linked by extensive hydrogen bonds across the interlayer occupied by Ca(2+) cations and H(2)O groups. In contrast to previous studies the approach here reveals five transformer H(2)O groups (compared to three expected by a previous study) and two non-transformer H(2)O groups. One of the transformer H(2)O groups is, nevertheless, not linked to any metal cation, which is a less frequent type of H(2)O bonding in solid state compounds and minerals. The structural formula of phurcalite has been therefore redefined as {Ca(2)(H(2) ([3])O)(5)(H(2) ([4])O)(2)}[(UO(2))(3)O(2)(PO(4))(2)], Z = 8. International Union of Crystallography 2020-05-27 /pmc/articles/PMC7278090/ /pubmed/32831267 http://dx.doi.org/10.1107/S2052520620005739 Text en © Jakub Plášil et al. 2020 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Research Papers
Plášil, Jakub
Kiefer, Boris
Ghazisaeed, Seyedat
Philippo, Simon
Hydrogen bonding in the crystal structure of phurcalite, Ca(2)[(UO(2))(3)O(2)(PO(4))(2)]·7H(2)O: single-crystal X-ray study and TORQUE calculations
title Hydrogen bonding in the crystal structure of phurcalite, Ca(2)[(UO(2))(3)O(2)(PO(4))(2)]·7H(2)O: single-crystal X-ray study and TORQUE calculations
title_full Hydrogen bonding in the crystal structure of phurcalite, Ca(2)[(UO(2))(3)O(2)(PO(4))(2)]·7H(2)O: single-crystal X-ray study and TORQUE calculations
title_fullStr Hydrogen bonding in the crystal structure of phurcalite, Ca(2)[(UO(2))(3)O(2)(PO(4))(2)]·7H(2)O: single-crystal X-ray study and TORQUE calculations
title_full_unstemmed Hydrogen bonding in the crystal structure of phurcalite, Ca(2)[(UO(2))(3)O(2)(PO(4))(2)]·7H(2)O: single-crystal X-ray study and TORQUE calculations
title_short Hydrogen bonding in the crystal structure of phurcalite, Ca(2)[(UO(2))(3)O(2)(PO(4))(2)]·7H(2)O: single-crystal X-ray study and TORQUE calculations
title_sort hydrogen bonding in the crystal structure of phurcalite, ca(2)[(uo(2))(3)o(2)(po(4))(2)]·7h(2)o: single-crystal x-ray study and torque calculations
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7278090/
https://www.ncbi.nlm.nih.gov/pubmed/32831267
http://dx.doi.org/10.1107/S2052520620005739
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