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Enhanced X-ray diffraction of in vivo-grown μNS crystals by viscous jets at XFELs

μNS is a 70 kDa major nonstructural protein of avian reoviruses, which cause significant economic losses in the poultry industry. They replicate inside viral factories in host cells, and the μNS protein has been suggested to be the minimal viral factor required for factory formation. Thus, determini...

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Autores principales: Nagaratnam, Nirupa, Tang, Yanyang, Botha, Sabine, Saul, Justin, Li, Chufeng, Hu, Hao, Zaare, Sahba, Hunter, Mark, Lowry, David, Weierstall, Uwe, Zatsepin, Nadia, Spence, John C. H., Qiu, Ji, LaBaer, Joshua, Fromme, Petra, Martin-Garcia, Jose M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7278499/
https://www.ncbi.nlm.nih.gov/pubmed/32510469
http://dx.doi.org/10.1107/S2053230X20006172
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author Nagaratnam, Nirupa
Tang, Yanyang
Botha, Sabine
Saul, Justin
Li, Chufeng
Hu, Hao
Zaare, Sahba
Hunter, Mark
Lowry, David
Weierstall, Uwe
Zatsepin, Nadia
Spence, John C. H.
Qiu, Ji
LaBaer, Joshua
Fromme, Petra
Martin-Garcia, Jose M.
author_facet Nagaratnam, Nirupa
Tang, Yanyang
Botha, Sabine
Saul, Justin
Li, Chufeng
Hu, Hao
Zaare, Sahba
Hunter, Mark
Lowry, David
Weierstall, Uwe
Zatsepin, Nadia
Spence, John C. H.
Qiu, Ji
LaBaer, Joshua
Fromme, Petra
Martin-Garcia, Jose M.
author_sort Nagaratnam, Nirupa
collection PubMed
description μNS is a 70 kDa major nonstructural protein of avian reoviruses, which cause significant economic losses in the poultry industry. They replicate inside viral factories in host cells, and the μNS protein has been suggested to be the minimal viral factor required for factory formation. Thus, determining the structure of μNS is of great importance for understanding its role in viral infection. In the study presented here, a fragment consisting of residues 448–605 of μNS was expressed as an EGFP fusion protein in Sf9 insect cells. EGFP-μNS((448–605)) crystallization in Sf9 cells was monitored and verified by several imaging techniques. Cells infected with the EGFP-μNS((448–605)) baculovirus formed rod-shaped microcrystals (5–15 µm in length) which were reconstituted in high-viscosity media (LCP and agarose) and investigated by serial femtosecond X-ray diffraction using viscous jets at an X-ray free-electron laser (XFEL). The crystals diffracted to 4.5 Å resolution. A total of 4227 diffraction snapshots were successfully indexed into a hexagonal lattice with unit-cell parameters a = 109.29, b = 110.29, c = 324.97 Å. The final data set was merged and refined to 7.0 Å resolution. Preliminary electron-density maps were obtained. While more diffraction data are required to solve the structure of μNS((448–605)), the current experimental strategy, which couples high-viscosity crystal delivery at an XFEL with in cellulo crystallization, paves the way towards structure determination of the μNS protein.
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spelling pubmed-72784992020-06-25 Enhanced X-ray diffraction of in vivo-grown μNS crystals by viscous jets at XFELs Nagaratnam, Nirupa Tang, Yanyang Botha, Sabine Saul, Justin Li, Chufeng Hu, Hao Zaare, Sahba Hunter, Mark Lowry, David Weierstall, Uwe Zatsepin, Nadia Spence, John C. H. Qiu, Ji LaBaer, Joshua Fromme, Petra Martin-Garcia, Jose M. Acta Crystallogr F Struct Biol Commun Method Communications μNS is a 70 kDa major nonstructural protein of avian reoviruses, which cause significant economic losses in the poultry industry. They replicate inside viral factories in host cells, and the μNS protein has been suggested to be the minimal viral factor required for factory formation. Thus, determining the structure of μNS is of great importance for understanding its role in viral infection. In the study presented here, a fragment consisting of residues 448–605 of μNS was expressed as an EGFP fusion protein in Sf9 insect cells. EGFP-μNS((448–605)) crystallization in Sf9 cells was monitored and verified by several imaging techniques. Cells infected with the EGFP-μNS((448–605)) baculovirus formed rod-shaped microcrystals (5–15 µm in length) which were reconstituted in high-viscosity media (LCP and agarose) and investigated by serial femtosecond X-ray diffraction using viscous jets at an X-ray free-electron laser (XFEL). The crystals diffracted to 4.5 Å resolution. A total of 4227 diffraction snapshots were successfully indexed into a hexagonal lattice with unit-cell parameters a = 109.29, b = 110.29, c = 324.97 Å. The final data set was merged and refined to 7.0 Å resolution. Preliminary electron-density maps were obtained. While more diffraction data are required to solve the structure of μNS((448–605)), the current experimental strategy, which couples high-viscosity crystal delivery at an XFEL with in cellulo crystallization, paves the way towards structure determination of the μNS protein. International Union of Crystallography 2020-05-29 /pmc/articles/PMC7278499/ /pubmed/32510469 http://dx.doi.org/10.1107/S2053230X20006172 Text en © Nagaratnam et al. 2020 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Method Communications
Nagaratnam, Nirupa
Tang, Yanyang
Botha, Sabine
Saul, Justin
Li, Chufeng
Hu, Hao
Zaare, Sahba
Hunter, Mark
Lowry, David
Weierstall, Uwe
Zatsepin, Nadia
Spence, John C. H.
Qiu, Ji
LaBaer, Joshua
Fromme, Petra
Martin-Garcia, Jose M.
Enhanced X-ray diffraction of in vivo-grown μNS crystals by viscous jets at XFELs
title Enhanced X-ray diffraction of in vivo-grown μNS crystals by viscous jets at XFELs
title_full Enhanced X-ray diffraction of in vivo-grown μNS crystals by viscous jets at XFELs
title_fullStr Enhanced X-ray diffraction of in vivo-grown μNS crystals by viscous jets at XFELs
title_full_unstemmed Enhanced X-ray diffraction of in vivo-grown μNS crystals by viscous jets at XFELs
title_short Enhanced X-ray diffraction of in vivo-grown μNS crystals by viscous jets at XFELs
title_sort enhanced x-ray diffraction of in vivo-grown μns crystals by viscous jets at xfels
topic Method Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7278499/
https://www.ncbi.nlm.nih.gov/pubmed/32510469
http://dx.doi.org/10.1107/S2053230X20006172
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