Cargando…
An Image Registration-Based Method for EPI Distortion Correction Based on Opposite Phase Encoding (COPE)
Surprisingly, estimated voxel displacement maps (VDMs), based on image registration, seem to work just as well to correct geometrical distortion in functional MRI data (EPI) as VDMs based on actual information about the magnetic field. In this article, we compare our new image registration-based dis...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7279930/ http://dx.doi.org/10.1007/978-3-030-50120-4_12 |
_version_ | 1783543649265516544 |
---|---|
author | Breman, Hester Mulders, Joost Fritz, Levin Peters, Judith Pyles, John Eck, Judith Bastiani, Matteo Roebroeck, Alard Ashburner, John Goebel, Rainer |
author_facet | Breman, Hester Mulders, Joost Fritz, Levin Peters, Judith Pyles, John Eck, Judith Bastiani, Matteo Roebroeck, Alard Ashburner, John Goebel, Rainer |
author_sort | Breman, Hester |
collection | PubMed |
description | Surprisingly, estimated voxel displacement maps (VDMs), based on image registration, seem to work just as well to correct geometrical distortion in functional MRI data (EPI) as VDMs based on actual information about the magnetic field. In this article, we compare our new image registration-based distortion correction method ‘COPE’ to an implementation of the pixelshift method. Our approach builds on existing image registration-based techniques using opposite phase encoding, extending these by local cost aggregation. Comparison of these methods with 3T and 7T spin-echo (SE) and gradient-echo (GE) data show that the image registration-based method is a good alternative to the fieldmap-based EPI distortion correction method. |
format | Online Article Text |
id | pubmed-7279930 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
record_format | MEDLINE/PubMed |
spelling | pubmed-72799302020-06-09 An Image Registration-Based Method for EPI Distortion Correction Based on Opposite Phase Encoding (COPE) Breman, Hester Mulders, Joost Fritz, Levin Peters, Judith Pyles, John Eck, Judith Bastiani, Matteo Roebroeck, Alard Ashburner, John Goebel, Rainer Biomedical Image Registration Article Surprisingly, estimated voxel displacement maps (VDMs), based on image registration, seem to work just as well to correct geometrical distortion in functional MRI data (EPI) as VDMs based on actual information about the magnetic field. In this article, we compare our new image registration-based distortion correction method ‘COPE’ to an implementation of the pixelshift method. Our approach builds on existing image registration-based techniques using opposite phase encoding, extending these by local cost aggregation. Comparison of these methods with 3T and 7T spin-echo (SE) and gradient-echo (GE) data show that the image registration-based method is a good alternative to the fieldmap-based EPI distortion correction method. 2020-05-13 /pmc/articles/PMC7279930/ http://dx.doi.org/10.1007/978-3-030-50120-4_12 Text en © Springer Nature Switzerland AG 2020 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Article Breman, Hester Mulders, Joost Fritz, Levin Peters, Judith Pyles, John Eck, Judith Bastiani, Matteo Roebroeck, Alard Ashburner, John Goebel, Rainer An Image Registration-Based Method for EPI Distortion Correction Based on Opposite Phase Encoding (COPE) |
title | An Image Registration-Based Method for EPI Distortion Correction Based on Opposite Phase Encoding (COPE) |
title_full | An Image Registration-Based Method for EPI Distortion Correction Based on Opposite Phase Encoding (COPE) |
title_fullStr | An Image Registration-Based Method for EPI Distortion Correction Based on Opposite Phase Encoding (COPE) |
title_full_unstemmed | An Image Registration-Based Method for EPI Distortion Correction Based on Opposite Phase Encoding (COPE) |
title_short | An Image Registration-Based Method for EPI Distortion Correction Based on Opposite Phase Encoding (COPE) |
title_sort | image registration-based method for epi distortion correction based on opposite phase encoding (cope) |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7279930/ http://dx.doi.org/10.1007/978-3-030-50120-4_12 |
work_keys_str_mv | AT bremanhester animageregistrationbasedmethodforepidistortioncorrectionbasedonoppositephaseencodingcope AT muldersjoost animageregistrationbasedmethodforepidistortioncorrectionbasedonoppositephaseencodingcope AT fritzlevin animageregistrationbasedmethodforepidistortioncorrectionbasedonoppositephaseencodingcope AT petersjudith animageregistrationbasedmethodforepidistortioncorrectionbasedonoppositephaseencodingcope AT pylesjohn animageregistrationbasedmethodforepidistortioncorrectionbasedonoppositephaseencodingcope AT eckjudith animageregistrationbasedmethodforepidistortioncorrectionbasedonoppositephaseencodingcope AT bastianimatteo animageregistrationbasedmethodforepidistortioncorrectionbasedonoppositephaseencodingcope AT roebroeckalard animageregistrationbasedmethodforepidistortioncorrectionbasedonoppositephaseencodingcope AT ashburnerjohn animageregistrationbasedmethodforepidistortioncorrectionbasedonoppositephaseencodingcope AT goebelrainer animageregistrationbasedmethodforepidistortioncorrectionbasedonoppositephaseencodingcope AT bremanhester imageregistrationbasedmethodforepidistortioncorrectionbasedonoppositephaseencodingcope AT muldersjoost imageregistrationbasedmethodforepidistortioncorrectionbasedonoppositephaseencodingcope AT fritzlevin imageregistrationbasedmethodforepidistortioncorrectionbasedonoppositephaseencodingcope AT petersjudith imageregistrationbasedmethodforepidistortioncorrectionbasedonoppositephaseencodingcope AT pylesjohn imageregistrationbasedmethodforepidistortioncorrectionbasedonoppositephaseencodingcope AT eckjudith imageregistrationbasedmethodforepidistortioncorrectionbasedonoppositephaseencodingcope AT bastianimatteo imageregistrationbasedmethodforepidistortioncorrectionbasedonoppositephaseencodingcope AT roebroeckalard imageregistrationbasedmethodforepidistortioncorrectionbasedonoppositephaseencodingcope AT ashburnerjohn imageregistrationbasedmethodforepidistortioncorrectionbasedonoppositephaseencodingcope AT goebelrainer imageregistrationbasedmethodforepidistortioncorrectionbasedonoppositephaseencodingcope |