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An Image Registration-Based Method for EPI Distortion Correction Based on Opposite Phase Encoding (COPE)

Surprisingly, estimated voxel displacement maps (VDMs), based on image registration, seem to work just as well to correct geometrical distortion in functional MRI data (EPI) as VDMs based on actual information about the magnetic field. In this article, we compare our new image registration-based dis...

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Detalles Bibliográficos
Autores principales: Breman, Hester, Mulders, Joost, Fritz, Levin, Peters, Judith, Pyles, John, Eck, Judith, Bastiani, Matteo, Roebroeck, Alard, Ashburner, John, Goebel, Rainer
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7279930/
http://dx.doi.org/10.1007/978-3-030-50120-4_12
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author Breman, Hester
Mulders, Joost
Fritz, Levin
Peters, Judith
Pyles, John
Eck, Judith
Bastiani, Matteo
Roebroeck, Alard
Ashburner, John
Goebel, Rainer
author_facet Breman, Hester
Mulders, Joost
Fritz, Levin
Peters, Judith
Pyles, John
Eck, Judith
Bastiani, Matteo
Roebroeck, Alard
Ashburner, John
Goebel, Rainer
author_sort Breman, Hester
collection PubMed
description Surprisingly, estimated voxel displacement maps (VDMs), based on image registration, seem to work just as well to correct geometrical distortion in functional MRI data (EPI) as VDMs based on actual information about the magnetic field. In this article, we compare our new image registration-based distortion correction method ‘COPE’ to an implementation of the pixelshift method. Our approach builds on existing image registration-based techniques using opposite phase encoding, extending these by local cost aggregation. Comparison of these methods with 3T and 7T spin-echo (SE) and gradient-echo (GE) data show that the image registration-based method is a good alternative to the fieldmap-based EPI distortion correction method.
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spelling pubmed-72799302020-06-09 An Image Registration-Based Method for EPI Distortion Correction Based on Opposite Phase Encoding (COPE) Breman, Hester Mulders, Joost Fritz, Levin Peters, Judith Pyles, John Eck, Judith Bastiani, Matteo Roebroeck, Alard Ashburner, John Goebel, Rainer Biomedical Image Registration Article Surprisingly, estimated voxel displacement maps (VDMs), based on image registration, seem to work just as well to correct geometrical distortion in functional MRI data (EPI) as VDMs based on actual information about the magnetic field. In this article, we compare our new image registration-based distortion correction method ‘COPE’ to an implementation of the pixelshift method. Our approach builds on existing image registration-based techniques using opposite phase encoding, extending these by local cost aggregation. Comparison of these methods with 3T and 7T spin-echo (SE) and gradient-echo (GE) data show that the image registration-based method is a good alternative to the fieldmap-based EPI distortion correction method. 2020-05-13 /pmc/articles/PMC7279930/ http://dx.doi.org/10.1007/978-3-030-50120-4_12 Text en © Springer Nature Switzerland AG 2020 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Article
Breman, Hester
Mulders, Joost
Fritz, Levin
Peters, Judith
Pyles, John
Eck, Judith
Bastiani, Matteo
Roebroeck, Alard
Ashburner, John
Goebel, Rainer
An Image Registration-Based Method for EPI Distortion Correction Based on Opposite Phase Encoding (COPE)
title An Image Registration-Based Method for EPI Distortion Correction Based on Opposite Phase Encoding (COPE)
title_full An Image Registration-Based Method for EPI Distortion Correction Based on Opposite Phase Encoding (COPE)
title_fullStr An Image Registration-Based Method for EPI Distortion Correction Based on Opposite Phase Encoding (COPE)
title_full_unstemmed An Image Registration-Based Method for EPI Distortion Correction Based on Opposite Phase Encoding (COPE)
title_short An Image Registration-Based Method for EPI Distortion Correction Based on Opposite Phase Encoding (COPE)
title_sort image registration-based method for epi distortion correction based on opposite phase encoding (cope)
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7279930/
http://dx.doi.org/10.1007/978-3-030-50120-4_12
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