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Reinforced Redetection of Landmark in Pre- and Post-operative Brain Scan Using Anatomical Guidance for Image Alignment

Re-identifying locations of interest in pre- and post-operative images is a hard identification problem, as the anatomical landscape changes dramatically due to tumor resection and tissue displacement. Classical image registration techniques oftentimes fail in vicinity of the tumor, where the enclos...

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Autores principales: Waldmannstetter, Diana, Navarro, Fernando, Wiestler, Benedikt, Kirschke, Jan S., Sekuboyina, Anjany, Molero, Ester, Menze, Bjoern H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7279932/
http://dx.doi.org/10.1007/978-3-030-50120-4_8
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author Waldmannstetter, Diana
Navarro, Fernando
Wiestler, Benedikt
Kirschke, Jan S.
Sekuboyina, Anjany
Molero, Ester
Menze, Bjoern H.
author_facet Waldmannstetter, Diana
Navarro, Fernando
Wiestler, Benedikt
Kirschke, Jan S.
Sekuboyina, Anjany
Molero, Ester
Menze, Bjoern H.
author_sort Waldmannstetter, Diana
collection PubMed
description Re-identifying locations of interest in pre- and post-operative images is a hard identification problem, as the anatomical landscape changes dramatically due to tumor resection and tissue displacement. Classical image registration techniques oftentimes fail in vicinity of the tumor, where the enclosing structures are massively altered from one scan to another. Still, locations nearby the tumor or the resection cavity are the most relevant for evaluating tumor progression patterns and for comparing pre- and post-operative radiomic signatures. We address this issue by exploring a Reinforcement Learning (RL) approach. An artificial agent is self-taught to find the optimal path towards a target driven by a feedback signal from the environment. Incorporating anatomical guidance, we restrict the agent’s search space to surgery-unaffected structures only. By defining landmarks for each patient individually, we aim to obtain a patient-specific representation of its differential radiomic features across different time points for enhancing image alignment. Estimated landmarks reach a remarkable mean distance error around 3 mm. In addition, they show a high agreement with expert annotations on a challenging dataset of MR scans from the brain before and after tumor resection.
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spelling pubmed-72799322020-06-09 Reinforced Redetection of Landmark in Pre- and Post-operative Brain Scan Using Anatomical Guidance for Image Alignment Waldmannstetter, Diana Navarro, Fernando Wiestler, Benedikt Kirschke, Jan S. Sekuboyina, Anjany Molero, Ester Menze, Bjoern H. Biomedical Image Registration Article Re-identifying locations of interest in pre- and post-operative images is a hard identification problem, as the anatomical landscape changes dramatically due to tumor resection and tissue displacement. Classical image registration techniques oftentimes fail in vicinity of the tumor, where the enclosing structures are massively altered from one scan to another. Still, locations nearby the tumor or the resection cavity are the most relevant for evaluating tumor progression patterns and for comparing pre- and post-operative radiomic signatures. We address this issue by exploring a Reinforcement Learning (RL) approach. An artificial agent is self-taught to find the optimal path towards a target driven by a feedback signal from the environment. Incorporating anatomical guidance, we restrict the agent’s search space to surgery-unaffected structures only. By defining landmarks for each patient individually, we aim to obtain a patient-specific representation of its differential radiomic features across different time points for enhancing image alignment. Estimated landmarks reach a remarkable mean distance error around 3 mm. In addition, they show a high agreement with expert annotations on a challenging dataset of MR scans from the brain before and after tumor resection. 2020-05-13 /pmc/articles/PMC7279932/ http://dx.doi.org/10.1007/978-3-030-50120-4_8 Text en © Springer Nature Switzerland AG 2020 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Article
Waldmannstetter, Diana
Navarro, Fernando
Wiestler, Benedikt
Kirschke, Jan S.
Sekuboyina, Anjany
Molero, Ester
Menze, Bjoern H.
Reinforced Redetection of Landmark in Pre- and Post-operative Brain Scan Using Anatomical Guidance for Image Alignment
title Reinforced Redetection of Landmark in Pre- and Post-operative Brain Scan Using Anatomical Guidance for Image Alignment
title_full Reinforced Redetection of Landmark in Pre- and Post-operative Brain Scan Using Anatomical Guidance for Image Alignment
title_fullStr Reinforced Redetection of Landmark in Pre- and Post-operative Brain Scan Using Anatomical Guidance for Image Alignment
title_full_unstemmed Reinforced Redetection of Landmark in Pre- and Post-operative Brain Scan Using Anatomical Guidance for Image Alignment
title_short Reinforced Redetection of Landmark in Pre- and Post-operative Brain Scan Using Anatomical Guidance for Image Alignment
title_sort reinforced redetection of landmark in pre- and post-operative brain scan using anatomical guidance for image alignment
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7279932/
http://dx.doi.org/10.1007/978-3-030-50120-4_8
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