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Siccibacter turicensis from Kangaroo Scats: Possible Implication in Cellulose Digestion

Microbiota in the kangaroo gut degrade cellulose, contributing to the kangaroo’s energy and survival. In this preliminary study, to discover more about the gut microbes that contribute to the survival of kangaroos, cellulose-degrading bacteria were isolated from kangaroo scats by selection on solidi...

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Autores principales: Dhakal, Sudip, Boath, Jarryd M., Van, Thi Thu Hao, Moore, Robert J., Macreadie, Ian G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7284360/
https://www.ncbi.nlm.nih.gov/pubmed/32349400
http://dx.doi.org/10.3390/microorganisms8050635
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author Dhakal, Sudip
Boath, Jarryd M.
Van, Thi Thu Hao
Moore, Robert J.
Macreadie, Ian G.
author_facet Dhakal, Sudip
Boath, Jarryd M.
Van, Thi Thu Hao
Moore, Robert J.
Macreadie, Ian G.
author_sort Dhakal, Sudip
collection PubMed
description Microbiota in the kangaroo gut degrade cellulose, contributing to the kangaroo’s energy and survival. In this preliminary study, to discover more about the gut microbes that contribute to the survival of kangaroos, cellulose-degrading bacteria were isolated from kangaroo scats by selection on solidified media containing carboxymethyl cellulose as the main carbon source. One frequently occurring aerobic bacterium was Siccibacter turicensis, a microbe previously isolated in fruit powder and from a patient with angular cheilitis. The whole genome sequence of the kangaroo isolate was obtained using the Illumina MiSeq platform. Its sequence shared 97.98% identity of the S. turicensis Type strain, and the ability of the Type strain to degrade cellulose was confirmed. Analysis of the genomic data focused on the cellulose operon. In addition to genes from the operon, we suggest that a gene following the operon may have an important role in regulating cellulose metabolism by signal transduction. This is the first report of S. turicensis found within microbiota of the animal gut. Because of its frequent presence in the kangaroo gut, we suggest that S. turicensis plays a role in cellulose digestion for kangaroos.
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spelling pubmed-72843602020-08-13 Siccibacter turicensis from Kangaroo Scats: Possible Implication in Cellulose Digestion Dhakal, Sudip Boath, Jarryd M. Van, Thi Thu Hao Moore, Robert J. Macreadie, Ian G. Microorganisms Article Microbiota in the kangaroo gut degrade cellulose, contributing to the kangaroo’s energy and survival. In this preliminary study, to discover more about the gut microbes that contribute to the survival of kangaroos, cellulose-degrading bacteria were isolated from kangaroo scats by selection on solidified media containing carboxymethyl cellulose as the main carbon source. One frequently occurring aerobic bacterium was Siccibacter turicensis, a microbe previously isolated in fruit powder and from a patient with angular cheilitis. The whole genome sequence of the kangaroo isolate was obtained using the Illumina MiSeq platform. Its sequence shared 97.98% identity of the S. turicensis Type strain, and the ability of the Type strain to degrade cellulose was confirmed. Analysis of the genomic data focused on the cellulose operon. In addition to genes from the operon, we suggest that a gene following the operon may have an important role in regulating cellulose metabolism by signal transduction. This is the first report of S. turicensis found within microbiota of the animal gut. Because of its frequent presence in the kangaroo gut, we suggest that S. turicensis plays a role in cellulose digestion for kangaroos. MDPI 2020-04-27 /pmc/articles/PMC7284360/ /pubmed/32349400 http://dx.doi.org/10.3390/microorganisms8050635 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Dhakal, Sudip
Boath, Jarryd M.
Van, Thi Thu Hao
Moore, Robert J.
Macreadie, Ian G.
Siccibacter turicensis from Kangaroo Scats: Possible Implication in Cellulose Digestion
title Siccibacter turicensis from Kangaroo Scats: Possible Implication in Cellulose Digestion
title_full Siccibacter turicensis from Kangaroo Scats: Possible Implication in Cellulose Digestion
title_fullStr Siccibacter turicensis from Kangaroo Scats: Possible Implication in Cellulose Digestion
title_full_unstemmed Siccibacter turicensis from Kangaroo Scats: Possible Implication in Cellulose Digestion
title_short Siccibacter turicensis from Kangaroo Scats: Possible Implication in Cellulose Digestion
title_sort siccibacter turicensis from kangaroo scats: possible implication in cellulose digestion
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7284360/
https://www.ncbi.nlm.nih.gov/pubmed/32349400
http://dx.doi.org/10.3390/microorganisms8050635
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