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Data-Driven Cervical Cancer Prediction Model with Outlier Detection and Over-Sampling Methods
Globally, cervical cancer remains as the foremost prevailing cancer in females. Hence, it is necessary to distinguish the importance of risk factors of cervical cancer to classify potential patients. The present work proposes a cervical cancer prediction model (CCPM) that offers early prediction of...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7284557/ https://www.ncbi.nlm.nih.gov/pubmed/32429090 http://dx.doi.org/10.3390/s20102809 |
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author | Ijaz, Muhammad Fazal Attique, Muhammad Son, Youngdoo |
author_facet | Ijaz, Muhammad Fazal Attique, Muhammad Son, Youngdoo |
author_sort | Ijaz, Muhammad Fazal |
collection | PubMed |
description | Globally, cervical cancer remains as the foremost prevailing cancer in females. Hence, it is necessary to distinguish the importance of risk factors of cervical cancer to classify potential patients. The present work proposes a cervical cancer prediction model (CCPM) that offers early prediction of cervical cancer using risk factors as inputs. The CCPM first removes outliers by using outlier detection methods such as density-based spatial clustering of applications with noise (DBSCAN) and isolation forest (iForest) and by increasing the number of cases in the dataset in a balanced way, for example, through synthetic minority over-sampling technique (SMOTE) and SMOTE with Tomek link (SMOTETomek). Finally, it employs random forest (RF) as a classifier. Thus, CCPM lies on four scenarios: (1) DBSCAN + SMOTETomek + RF, (2) DBSCAN + SMOTE+ RF, (3) iForest + SMOTETomek + RF, and (4) iForest + SMOTE + RF. A dataset of 858 potential patients was used to validate the performance of the proposed method. We found that combinations of iForest with SMOTE and iForest with SMOTETomek provided better performances than those of DBSCAN with SMOTE and DBSCAN with SMOTETomek. We also observed that RF performed the best among several popular machine learning classifiers. Furthermore, the proposed CCPM showed better accuracy than previously proposed methods for forecasting cervical cancer. In addition, a mobile application that can collect cervical cancer risk factors data and provides results from CCPM is developed for instant and proper action at the initial stage of cervical cancer. |
format | Online Article Text |
id | pubmed-7284557 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-72845572020-06-15 Data-Driven Cervical Cancer Prediction Model with Outlier Detection and Over-Sampling Methods Ijaz, Muhammad Fazal Attique, Muhammad Son, Youngdoo Sensors (Basel) Article Globally, cervical cancer remains as the foremost prevailing cancer in females. Hence, it is necessary to distinguish the importance of risk factors of cervical cancer to classify potential patients. The present work proposes a cervical cancer prediction model (CCPM) that offers early prediction of cervical cancer using risk factors as inputs. The CCPM first removes outliers by using outlier detection methods such as density-based spatial clustering of applications with noise (DBSCAN) and isolation forest (iForest) and by increasing the number of cases in the dataset in a balanced way, for example, through synthetic minority over-sampling technique (SMOTE) and SMOTE with Tomek link (SMOTETomek). Finally, it employs random forest (RF) as a classifier. Thus, CCPM lies on four scenarios: (1) DBSCAN + SMOTETomek + RF, (2) DBSCAN + SMOTE+ RF, (3) iForest + SMOTETomek + RF, and (4) iForest + SMOTE + RF. A dataset of 858 potential patients was used to validate the performance of the proposed method. We found that combinations of iForest with SMOTE and iForest with SMOTETomek provided better performances than those of DBSCAN with SMOTE and DBSCAN with SMOTETomek. We also observed that RF performed the best among several popular machine learning classifiers. Furthermore, the proposed CCPM showed better accuracy than previously proposed methods for forecasting cervical cancer. In addition, a mobile application that can collect cervical cancer risk factors data and provides results from CCPM is developed for instant and proper action at the initial stage of cervical cancer. MDPI 2020-05-15 /pmc/articles/PMC7284557/ /pubmed/32429090 http://dx.doi.org/10.3390/s20102809 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Ijaz, Muhammad Fazal Attique, Muhammad Son, Youngdoo Data-Driven Cervical Cancer Prediction Model with Outlier Detection and Over-Sampling Methods |
title | Data-Driven Cervical Cancer Prediction Model with Outlier Detection and Over-Sampling Methods |
title_full | Data-Driven Cervical Cancer Prediction Model with Outlier Detection and Over-Sampling Methods |
title_fullStr | Data-Driven Cervical Cancer Prediction Model with Outlier Detection and Over-Sampling Methods |
title_full_unstemmed | Data-Driven Cervical Cancer Prediction Model with Outlier Detection and Over-Sampling Methods |
title_short | Data-Driven Cervical Cancer Prediction Model with Outlier Detection and Over-Sampling Methods |
title_sort | data-driven cervical cancer prediction model with outlier detection and over-sampling methods |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7284557/ https://www.ncbi.nlm.nih.gov/pubmed/32429090 http://dx.doi.org/10.3390/s20102809 |
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