Cargando…

Comparative Analysis of Root Transcriptome Reveals Candidate Genes and Expression Divergence of Homoeologous Genes in Response to Water Stress in Wheat

Crop cultivars with larger root systems have an increased ability to absorb water and nutrients under conditions of water deficit. To unravel the molecular mechanism of water-stress tolerance in wheat, we performed RNA-seq analysis on the two genotypes, Colotana 296-52 (Colotana) and Tincurrin, cont...

Descripción completa

Detalles Bibliográficos
Autores principales:	Derakhshani, Behnam, Ayalew, Habtamu, Mishina, Kohei, Tanaka, Tsuyoshi, Kawahara, Yoshihiro, Jafary, Hossein, Oono, Youko
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2020
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7284651/ https://www.ncbi.nlm.nih.gov/pubmed/32392904 http://dx.doi.org/10.3390/plants9050596

Ejemplares similares

Combined QTL mapping and RNA-Seq profiling reveals candidate genes associated with cadmium tolerance in barley
por: Derakhshani, Behnam, et al.
Publicado: (2020)

Genetic resistance in barley against Japanese soil-borne wheat mosaic virus functions in the roots
por: Okada, Kaori, et al.
Publicado: (2023)

Characterisation of the wheat (triticum aestivum L.) transcriptome by de novo assembly for the discovery of phosphate starvation-responsive genes: gene expression in Pi-stressed wheat
por: Oono, Youko, et al.
Publicado: (2013)

Two dominant genes in barley (Hordeum vulgare L.) complementarily encode perfect resistance to Japanese soil-borne wheat mosaic virus
por: Okada, Kaori, et al.
Publicado: (2022)

Homoeologous gene silencing in tissue cultured wheat callus
por: Bottley, Andrew, et al.
Publicado: (2008)

Variation in the wheat AP2 homoeologs, the genes underlying lodicule development
por: Ning, Shunzong, et al.
Publicado: (2013)

Genome-Wide Analysis of Snf2 Gene Family Reveals Potential Role in Regulation of Spike Development in Barley
por: Chen, Gang, et al.
Publicado: (2022)

Overexpression of Three TaEXPA1 Homoeologous Genes with Distinct Expression Divergence in Hexaploid Wheat Exhibit Functional Retention in Arabidopsis
por: Hu, Zhaorong, et al.
Publicado: (2013)

Chromatin modification contributes to the expression divergence of three TaGS2 homoeologs in hexaploid wheat
por: Zhang, Wei, et al.
Publicado: (2017)

A high-throughput method for the detection of homoeologous gene deletions in hexaploid wheat
por: Fitzgerald, Timothy L, et al.
Publicado: (2010)

Patterns of homoeologous gene expression shown by RNA sequencing in hexaploid bread wheat
por: Leach, Lindsey J, et al.
Publicado: (2014)

Distinct expression and function of carotenoid metabolic genes and homoeologs in developing wheat grains
por: Qin, Xiaoqiong, et al.
Publicado: (2016)

Expression profiling of TaARGOS homoeologous drought responsive genes in bread wheat
por: Ahmed, Kashif, et al.
Publicado: (2022)

Homoeolog-specific transcriptional bias in allopolyploid wheat
por: Akhunova, Alina R, et al.
Publicado: (2010)

Cloning and characterization of the homoeologous genes for the Rec8-like meiotic cohesin in polyploid wheat
por: Ma, Guojia, et al.
Publicado: (2018)

Wheat Ym2 originated from Aegilops sharonensis and confers resistance to soil-borne Wheat yellow mosaic virus infection to the roots
por: Mishina, Kohei, et al.
Publicado: (2023)

Molecular and phylogenetic characterization of the homoeologous EPSP Synthase genes of allohexaploid wheat, Triticum aestivum (L.)
por: Aramrak, Attawan, et al.
Publicado: (2015)

Chromosomal Localization and Contribution of Three Homoeologous Genes to Biosynthesis of Cytosolic Aspartate Aminotransferase in Common Wheat
por: Maciąga, Marcin, et al.
Publicado: (2015)

Cytological diploidization of paleopolyploid genus Zea: Divergence between homoeologous chromosomes or activity of pairing regulator genes?
por: Poggio, Lidia, et al.
Publicado: (2018)

Transcriptome-scale homoeolog-specific transcript assemblies of bread wheat
por: Schreiber, Andreas W, et al.
Publicado: (2012)

Relationship between homoeologous regulatory and structural genes in allopolyploid genome – A case study in bread wheat
por: Khlestkina, Elena K, et al.
Publicado: (2008)

The RAD51 and DMC1 homoeologous genes of bread wheat: cloning, molecular characterization and expression analysis
por: Devisetty, Upendra Kumar, et al.
Publicado: (2010)

Simultaneous mutation detection of three homoeologous genes in wheat by High Resolution Melting analysis and Mutation Surveyor(®)
por: Dong, Chongmei, et al.
Publicado: (2009)

Genomic variants affecting homoeologous gene expression dosage contribute to agronomic trait variation in allopolyploid wheat
por: He, Fei, et al.
Publicado: (2022)

Effects of Allopolyploidization and Homoeologous Chromosomal Segment Exchange on Homoeolog Expression in a Synthetic Allotetraploid Wheat under Variable Environmental Conditions
por: Zhang, Zhibin, et al.
Publicado: (2023)

PCR-based landmark unique gene (PLUG) markers effectively assign homoeologous wheat genes to A, B and D genomes
por: Ishikawa, Goro, et al.
Publicado: (2007)

Development of a wheat single gene FISH map for analyzing homoeologous relationship and chromosomal rearrangements within the Triticeae
por: Danilova, Tatiana V., et al.
Publicado: (2014)

Genome-Wide Identification and Homoeologous Expression Analysis of PP2C Genes in Wheat (Triticum aestivum L.)
por: Yu, Xiaofen, et al.
Publicado: (2019)

TaNAC020 homoeologous genes are associated with higher thousand kernel weight and kernel length in Chinese wheat
por: Majeed, Uzma, et al.
Publicado: (2022)

Divergence of three BRX homoeologs in Brassica rapa and its effect on leaf morphology
por: Zhang, Yuanyuan, et al.
Publicado: (2021)

Simultaneous RNA-Seq Analysis of a Mixed Transcriptome of Rice and Blast Fungus Interaction
por: Kawahara, Yoshihiro, et al.
Publicado: (2012)

Loss-of-Function Mutations in Three Homoeologous PHYTOCLOCK 1 Genes in Common Wheat Are Associated with the Extra-Early Flowering Phenotype
por: Mizuno, Nobuyuki, et al.
Publicado: (2016)

Triple null mutations in starch synthase SSIIa gene homoeologs lead to high amylose and resistant starch in hexaploid wheat
por: Schoen, Adam, et al.
Publicado: (2021)

The defence‐associated transcriptome of hexaploid wheat displays homoeolog expression and induction bias
por: Powell, Jonathan J., et al.
Publicado: (2016)

High Transferability of Homoeolog-Specific Markers between Bread Wheat and Newly Synthesized Hexaploid Wheat Lines
por: Zeng, Deying, et al.
Publicado: (2016)

Putative interchromosomal rearrangements in the hexaploid wheat (Triticum aestivum L.) genotype ‘Chinese Spring’ revealed by gene locations on homoeologous chromosomes
por: Ma, Jian, et al.
Publicado: (2015)

Evolution of Deeper Rooting 1-like homoeologs in wheat entails the C-terminus mutations as well as gain and loss of auxin response elements
por: Ashraf, Almas, et al.
Publicado: (2019)

Development of genome-specific primers for homoeologous genes in allopolyploid species: the waxy and starch synthase II genes in allohexaploid wheat (Triticum aestivum L.) as examples
por: Huang, Xiu-Qiang, et al.
Publicado: (2010)

Duplicate gene evolution, homoeologous recombination, and transcriptome characterization in allopolyploid cotton
por: Flagel, Lex E, et al.
Publicado: (2012)

Genome-Wide Transcriptome Analysis Reveals that Cadmium Stress Signaling Controls the Expression of Genes in Drought Stress Signal Pathways in Rice
por: Oono, Youko, et al.
Publicado: (2014)

Cannot write session to /tmp/vufind_sessions/sess_5usil32e60l4075l2c1evmpva4