Cargando…

Comparative Genomics of the Rhodococcus Genus Shows Wide Distribution of Biodegradation Traits

The genus Rhodococcus exhibits great potential for bioremediation applications due to its huge metabolic diversity, including biotransformation of aromatic and aliphatic compounds. Comparative genomic studies of this genus are limited to a small number of genomes, while the high number of sequenced...

Descripción completa

Detalles Bibliográficos
Autores principales:	Garrido-Sanz, Daniel, Redondo-Nieto, Miguel, Martín, Marta, Rivilla, Rafael
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2020
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7285261/ https://www.ncbi.nlm.nih.gov/pubmed/32455698 http://dx.doi.org/10.3390/microorganisms8050774

Ejemplares similares

Analysis of the biodegradative and adaptive potential of the novel polychlorinated biphenyl degrader Rhodococcus sp. WAY2 revealed by its complete genome sequence
por: Garrido-Sanz, Daniel, et al.
Publicado: (2020)

Comparative genomics of the Pseudomonas corrugata subgroup reveals high species diversity and allows the description of Pseudomonas ogarae sp. nov.
por: Garrido-Sanz, Daniel, et al.
Publicado: (2021)

Membrane transport systems and the biodegradation potential and pathogenicity of genus Rhodococcus
por: de Carvalho, Carla C. C. R., et al.
Publicado: (2014)

In Silico Characterization and Phylogenetic Distribution of Extracellular Matrix Components in the Model Rhizobacteria Pseudomonas fluorescens F113 and Other Pseudomonads
por: Blanco-Romero, Esther, et al.
Publicado: (2020)

Genome-wide analysis of the FleQ direct regulon in Pseudomonas fluorescens F113 and Pseudomonas putida KT2440
por: Blanco-Romero, Esther, et al.
Publicado: (2018)

Metagenomic Analysis of a Biphenyl-Degrading Soil Bacterial Consortium Reveals the Metabolic Roles of Specific Populations
por: Garrido-Sanz, Daniel, et al.
Publicado: (2018)

Field scale biodegradation of total petroleum hydrocarbons and soil restoration by Ecopiles: microbiological analysis of the process
por: Martínez-Cuesta, Ruben, et al.
Publicado: (2023)

Genomic and Genetic Diversity within the Pseudomonas fluorescens Complex
por: Garrido-Sanz, Daniel, et al.
Publicado: (2016)

Correction: Genomic and Genetic Diversity within the Pseudomonas fluorescens Complex
por: Garrido-Sanz, Daniel, et al.
Publicado: (2016)

Transcriptomic analysis of Pseudomonas ogarae F113 reveals the antagonistic roles of AmrZ and FleQ during rhizosphere adaption
por: Blanco-Romero, Esther, et al.
Publicado: (2022)

Regulation of extracellular matrix components by AmrZ is mediated by c-di-GMP in Pseudomonas ogarae F113
por: Blanco-Romero, Esther, et al.
Publicado: (2022)

Adaption of Pseudomonas ogarae F113 to the Rhizosphere Environment—The AmrZ-FleQ Hub
por: Blanco-Romero, Esther, et al.
Publicado: (2023)

Metagenomic Insights into the Bacterial Functions of a Diesel-Degrading Consortium for the Rhizoremediation of Diesel-Polluted Soil
por: Garrido-Sanz, Daniel, et al.
Publicado: (2019)

An Orphan VrgG Auxiliary Module Related to the Type VI Secretion Systems from Pseudomonas ogarae F113 Mediates Bacterial Killing
por: Durán, David, et al.
Publicado: (2023)

Phylogenomic Analyses of Bradyrhizobium Reveal Uneven Distribution of the Lateral and Subpolar Flagellar Systems, Which Extends to Rhizobiales
por: Garrido-Sanz, Daniel, et al.
Publicado: (2019)

Use of whole genome sequences to develop a molecular phylogenetic framework for Rhodococcus fascians and the Rhodococcus genus
por: Creason, Allison L., et al.
Publicado: (2014)

Pseudomonas fluorescens F113 Can Produce a Second Flagellar Apparatus, Which Is Important for Plant Root Colonization
por: Barahona, Emma, et al.
Publicado: (2016)

Features of diclofenac biodegradation by Rhodococcus ruber IEGM 346
por: Ivshina, Irina B., et al.
Publicado: (2019)

Pseudomonas fluorescens F113 type VI secretion systems mediate bacterial killing and adaption to the rhizosphere microbiome
por: Durán, David, et al.
Publicado: (2021)

Genome-based exploration of the specialized metabolic capacities of the genus Rhodococcus
por: Ceniceros, Ana, et al.
Publicado: (2017)

Hydrocarbons Biodegradation by Rhodococcus: Assimilation of Hexadecane in Different Aggregate States
por: Thi Mo, Luong, et al.
Publicado: (2022)

Adhesion of Rhodococcus bacteria to solid hydrocarbons and enhanced biodegradation of these compounds
por: Ivshina, Irina B., et al.
Publicado: (2022)

Chemotactic Motility of Pseudomonas fluorescens F113 under Aerobic and Denitrification Conditions
por: Muriel, Candela, et al.
Publicado: (2015)

Classification of Isolates from the Pseudomonas fluorescens Complex into Phylogenomic Groups Based in Group-Specific Markers
por: Garrido-Sanz, Daniel, et al.
Publicado: (2017)

Biodegradation of butyronitrile and demonstration of its mineralization by Rhodococcus sp. MTB5
por: Mukram, Ismailsab, et al.
Publicado: (2016)

Biodegradation of Phenol by Rhodococcus sp. Strain SKC: Characterization and Kinetics Study
por: Wen, Yujuan, et al.
Publicado: (2020)

Rhodococcus Strains from the Specialized Collection of Alkanotrophs for Biodegradation of Aromatic Compounds
por: Krivoruchko, Anastasiia, et al.
Publicado: (2023)

AmrZ is a global transcriptional regulator implicated in iron uptake and environmental adaption in P. fluorescens F113
por: Martínez-Granero, Francisco, et al.
Publicado: (2014)

Draft Genome Sequence of Rhodococcus erythropolis DN1, a Crude Oil Biodegrader
por: Shevtsov, Alexander, et al.
Publicado: (2013)

Genome Sequence of Rhodococcus sp. Strain BCP1, a Biodegrader of Alkanes and Chlorinated Compounds
por: Cappelletti, M., et al.
Publicado: (2013)

Simultaneous heavy metal removal and anthracene biodegradation by the oleaginous bacteria Rhodococcus opacus
por: Goswami, Lalit, et al.
Publicado: (2017)

Biodegradation and Metabolic Pathway of 17β-Estradiol by Rhodococcus sp. ED55
por: Moreira, Irina S., et al.
Publicado: (2022)

Comparative Genomics of Pandoraea, a Genus Enriched in Xenobiotic Biodegradation and Metabolism
por: Peeters, Charlotte, et al.
Publicado: (2019)

Comparative Analysis of Three Bradyrhizobium diazoefficiens Genomes Show Specific Mutations Acquired during Selection for a Higher Motility Phenotype and Adaption to Laboratory Conditions
por: Lozano, Mauricio J., et al.
Publicado: (2021)

The Gac-Rsm and SadB Signal Transduction Pathways Converge on AlgU to Downregulate Motility in Pseudomonas fluorescens
por: Martínez-Granero, Francisco, et al.
Publicado: (2012)

Three independent signalling pathways repress motility in Pseudomonas fluorescens F113
por: Navazo, Ana, et al.
Publicado: (2009)

Stereoselective synthesis of whisky lactone isomers catalyzed by bacteria in the genus Rhodococcus
por: Hernik, Dawid, et al.
Publicado: (2023)

Genome Sequence of Rhodococcus opacus Strain R7, a Biodegrader of Mono- and Polycyclic Aromatic Hydrocarbons
por: Di Gennaro, P., et al.
Publicado: (2014)

Genome Sequence of Rhodococcus sp. Strain PML026, a Trehalolipid Biosurfactant Producer and Biodegrader of Oil and Alkanes
por: Sambles, C. M., et al.
Publicado: (2015)

Detection of gene clusters for biodegradation of alkanes and aromatic compounds in the Rhodococcus qingshengii VKM Ac-2784D genome
por: Markova, Yu.A., et al.
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_6tr0nul8evqo8ttr7sl51rli3b