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The sensitivity of network statistics to incomplete electrode sampling on intracranial EEG

Network neuroscience applied to epilepsy holds promise to map pathological networks, localize seizure generators, and inform targeted interventions to control seizures. However, incomplete sampling of the epileptic brain because of sparse placement of intracranial electrodes may affect model results...

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Autores principales: Conrad, Erin C., Bernabei, John M., Kini, Lohith G., Shah, Preya, Mikhail, Fadi, Kheder, Ammar, Shinohara, Russell T., Davis, Kathryn A., Bassett, Danielle S., Litt, Brian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MIT Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7286312/
https://www.ncbi.nlm.nih.gov/pubmed/32537538
http://dx.doi.org/10.1162/netn_a_00131
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author Conrad, Erin C.
Bernabei, John M.
Kini, Lohith G.
Shah, Preya
Mikhail, Fadi
Kheder, Ammar
Shinohara, Russell T.
Davis, Kathryn A.
Bassett, Danielle S.
Litt, Brian
author_facet Conrad, Erin C.
Bernabei, John M.
Kini, Lohith G.
Shah, Preya
Mikhail, Fadi
Kheder, Ammar
Shinohara, Russell T.
Davis, Kathryn A.
Bassett, Danielle S.
Litt, Brian
author_sort Conrad, Erin C.
collection PubMed
description Network neuroscience applied to epilepsy holds promise to map pathological networks, localize seizure generators, and inform targeted interventions to control seizures. However, incomplete sampling of the epileptic brain because of sparse placement of intracranial electrodes may affect model results. In this study, we evaluate the sensitivity of several published network measures to incomplete spatial sampling and propose an algorithm using network subsampling to determine confidence in model results. We retrospectively evaluated intracranial EEG data from 28 patients implanted with grid, strip, and depth electrodes during evaluation for epilepsy surgery. We recalculated global and local network metrics after randomly and systematically removing subsets of intracranial EEG electrode contacts. We found that sensitivity to incomplete sampling varied significantly across network metrics. This sensitivity was largely independent of whether seizure onset zone contacts were targeted or spared from removal. We present an algorithm using random subsampling to compute patient-specific confidence intervals for network localizations. Our findings highlight the difference in robustness between commonly used network metrics and provide tools to assess confidence in intracranial network localization. We present these techniques as an important step toward translating personalized network models of seizures into rigorous, quantitative approaches to invasive therapy.
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spelling pubmed-72863122020-06-11 The sensitivity of network statistics to incomplete electrode sampling on intracranial EEG Conrad, Erin C. Bernabei, John M. Kini, Lohith G. Shah, Preya Mikhail, Fadi Kheder, Ammar Shinohara, Russell T. Davis, Kathryn A. Bassett, Danielle S. Litt, Brian Netw Neurosci Research Articles Network neuroscience applied to epilepsy holds promise to map pathological networks, localize seizure generators, and inform targeted interventions to control seizures. However, incomplete sampling of the epileptic brain because of sparse placement of intracranial electrodes may affect model results. In this study, we evaluate the sensitivity of several published network measures to incomplete spatial sampling and propose an algorithm using network subsampling to determine confidence in model results. We retrospectively evaluated intracranial EEG data from 28 patients implanted with grid, strip, and depth electrodes during evaluation for epilepsy surgery. We recalculated global and local network metrics after randomly and systematically removing subsets of intracranial EEG electrode contacts. We found that sensitivity to incomplete sampling varied significantly across network metrics. This sensitivity was largely independent of whether seizure onset zone contacts were targeted or spared from removal. We present an algorithm using random subsampling to compute patient-specific confidence intervals for network localizations. Our findings highlight the difference in robustness between commonly used network metrics and provide tools to assess confidence in intracranial network localization. We present these techniques as an important step toward translating personalized network models of seizures into rigorous, quantitative approaches to invasive therapy. MIT Press 2020-05-01 /pmc/articles/PMC7286312/ /pubmed/32537538 http://dx.doi.org/10.1162/netn_a_00131 Text en © 2020 Massachusetts Institute of Technology This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. For a full description of the license, please visit https://creativecommons.org/licenses/by/4.0/legalcode.
spellingShingle Research Articles
Conrad, Erin C.
Bernabei, John M.
Kini, Lohith G.
Shah, Preya
Mikhail, Fadi
Kheder, Ammar
Shinohara, Russell T.
Davis, Kathryn A.
Bassett, Danielle S.
Litt, Brian
The sensitivity of network statistics to incomplete electrode sampling on intracranial EEG
title The sensitivity of network statistics to incomplete electrode sampling on intracranial EEG
title_full The sensitivity of network statistics to incomplete electrode sampling on intracranial EEG
title_fullStr The sensitivity of network statistics to incomplete electrode sampling on intracranial EEG
title_full_unstemmed The sensitivity of network statistics to incomplete electrode sampling on intracranial EEG
title_short The sensitivity of network statistics to incomplete electrode sampling on intracranial EEG
title_sort sensitivity of network statistics to incomplete electrode sampling on intracranial eeg
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7286312/
https://www.ncbi.nlm.nih.gov/pubmed/32537538
http://dx.doi.org/10.1162/netn_a_00131
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