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A High-Throughput Screening System Based on Droplet Microfluidics for Glucose Oxidase Gene Libraries

Glucose oxidase (GOx) is an important industrial enzyme that can be optimized for specific applications by mutagenesis and activity-based screening. To increase the efficiency of this approach, we have developed a new ultrahigh-throughput screening platform based on a microfluidic lab-on-chip device...

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Autores principales: Prodanović, Radivoje, Ung, W. Lloyd, Ilić Đurđić, Karla, Fischer, Rainer, Weitz, David A., Ostafe, Raluca
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7287683/
https://www.ncbi.nlm.nih.gov/pubmed/32455903
http://dx.doi.org/10.3390/molecules25102418
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author Prodanović, Radivoje
Ung, W. Lloyd
Ilić Đurđić, Karla
Fischer, Rainer
Weitz, David A.
Ostafe, Raluca
author_facet Prodanović, Radivoje
Ung, W. Lloyd
Ilić Đurđić, Karla
Fischer, Rainer
Weitz, David A.
Ostafe, Raluca
author_sort Prodanović, Radivoje
collection PubMed
description Glucose oxidase (GOx) is an important industrial enzyme that can be optimized for specific applications by mutagenesis and activity-based screening. To increase the efficiency of this approach, we have developed a new ultrahigh-throughput screening platform based on a microfluidic lab-on-chip device that allows the sorting of GOx mutants from a saturation mutagenesis library expressed on the surface of yeast cells. GOx activity was measured by monitoring the fluorescence of water microdroplets dispersed in perfluorinated oil. The signal was generated via a series of coupled enzyme reactions leading to the formation of fluorescein. Using this new method, we were able to enrich the yeast cell population by more than 35-fold for GOx mutants with higher than wild-type activity after two rounds of sorting, almost double the efficiency of our previously described flow cytometry platform. We identified and characterized novel GOx mutants, the most promising of which (M6) contained a combination of six point mutations that increased the catalytic constant k(cat) by 2.1-fold compared to wild-type GOx and by 1.4-fold compared to a parental GOx variant. The new microfluidic platform for GOx was therefore more sensitive than flow cytometry and supports comprehensive screens of gene libraries containing multiple mutations per gene.
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spelling pubmed-72876832020-06-15 A High-Throughput Screening System Based on Droplet Microfluidics for Glucose Oxidase Gene Libraries Prodanović, Radivoje Ung, W. Lloyd Ilić Đurđić, Karla Fischer, Rainer Weitz, David A. Ostafe, Raluca Molecules Article Glucose oxidase (GOx) is an important industrial enzyme that can be optimized for specific applications by mutagenesis and activity-based screening. To increase the efficiency of this approach, we have developed a new ultrahigh-throughput screening platform based on a microfluidic lab-on-chip device that allows the sorting of GOx mutants from a saturation mutagenesis library expressed on the surface of yeast cells. GOx activity was measured by monitoring the fluorescence of water microdroplets dispersed in perfluorinated oil. The signal was generated via a series of coupled enzyme reactions leading to the formation of fluorescein. Using this new method, we were able to enrich the yeast cell population by more than 35-fold for GOx mutants with higher than wild-type activity after two rounds of sorting, almost double the efficiency of our previously described flow cytometry platform. We identified and characterized novel GOx mutants, the most promising of which (M6) contained a combination of six point mutations that increased the catalytic constant k(cat) by 2.1-fold compared to wild-type GOx and by 1.4-fold compared to a parental GOx variant. The new microfluidic platform for GOx was therefore more sensitive than flow cytometry and supports comprehensive screens of gene libraries containing multiple mutations per gene. MDPI 2020-05-22 /pmc/articles/PMC7287683/ /pubmed/32455903 http://dx.doi.org/10.3390/molecules25102418 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Prodanović, Radivoje
Ung, W. Lloyd
Ilić Đurđić, Karla
Fischer, Rainer
Weitz, David A.
Ostafe, Raluca
A High-Throughput Screening System Based on Droplet Microfluidics for Glucose Oxidase Gene Libraries
title A High-Throughput Screening System Based on Droplet Microfluidics for Glucose Oxidase Gene Libraries
title_full A High-Throughput Screening System Based on Droplet Microfluidics for Glucose Oxidase Gene Libraries
title_fullStr A High-Throughput Screening System Based on Droplet Microfluidics for Glucose Oxidase Gene Libraries
title_full_unstemmed A High-Throughput Screening System Based on Droplet Microfluidics for Glucose Oxidase Gene Libraries
title_short A High-Throughput Screening System Based on Droplet Microfluidics for Glucose Oxidase Gene Libraries
title_sort high-throughput screening system based on droplet microfluidics for glucose oxidase gene libraries
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7287683/
https://www.ncbi.nlm.nih.gov/pubmed/32455903
http://dx.doi.org/10.3390/molecules25102418
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