Cargando…

Digital publishing isn't enough: the case for ‘blueprints’ in scientific communication

Since the time of Newton and Galileo, the tools for capturing and communicating science have remained conceptually unchanged — in essence, they consist of observations on paper (or electronic variants), followed by a ‘letter’ to the community to report your findings. These age-old tools are inadequa...

Descripción completa

Detalles Bibliográficos
Autores principales: Jennings-Antipov, Laura D., Gardner, Timothy S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Portland Press Ltd. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7289030/
https://www.ncbi.nlm.nih.gov/pubmed/33530672
http://dx.doi.org/10.1042/ETLS20180165
_version_ 1783545390267629568
author Jennings-Antipov, Laura D.
Gardner, Timothy S.
author_facet Jennings-Antipov, Laura D.
Gardner, Timothy S.
author_sort Jennings-Antipov, Laura D.
collection PubMed
description Since the time of Newton and Galileo, the tools for capturing and communicating science have remained conceptually unchanged — in essence, they consist of observations on paper (or electronic variants), followed by a ‘letter’ to the community to report your findings. These age-old tools are inadequate for the complexity of today's scientific challenges. If modern software engineering worked like science, programmers would not share open source code; they would take notes on their work and then publish long-form articles about their software. Months or years later, their colleagues would attempt to reproduce the software based on the article. It sounds a bit silly, and yet even, this level of prose-based methodological discourse has deteriorated in science communication. Materials and Methods sections of papers are often a vaguely written afterthought, leaving researchers baffled when they try to repeat a published finding. It's time for a fundamental shift in scientific communication and sharing, a shift akin to the advent of computer-aided design and source code versioning. Science needs reusable ‘blueprints’ for experiments replete with the experiment designs, material flows, reaction parameters, data, and analytical procedures. Such an approach could establish the foundations for truly open source science where these scientific blueprints form the digital ‘source code’ for a supply chain of high-quality innovations and discoveries.
format Online
Article
Text
id pubmed-7289030
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Portland Press Ltd.
record_format MEDLINE/PubMed
spelling pubmed-72890302020-06-18 Digital publishing isn't enough: the case for ‘blueprints’ in scientific communication Jennings-Antipov, Laura D. Gardner, Timothy S. Emerg Top Life Sci Perspective Since the time of Newton and Galileo, the tools for capturing and communicating science have remained conceptually unchanged — in essence, they consist of observations on paper (or electronic variants), followed by a ‘letter’ to the community to report your findings. These age-old tools are inadequate for the complexity of today's scientific challenges. If modern software engineering worked like science, programmers would not share open source code; they would take notes on their work and then publish long-form articles about their software. Months or years later, their colleagues would attempt to reproduce the software based on the article. It sounds a bit silly, and yet even, this level of prose-based methodological discourse has deteriorated in science communication. Materials and Methods sections of papers are often a vaguely written afterthought, leaving researchers baffled when they try to repeat a published finding. It's time for a fundamental shift in scientific communication and sharing, a shift akin to the advent of computer-aided design and source code versioning. Science needs reusable ‘blueprints’ for experiments replete with the experiment designs, material flows, reaction parameters, data, and analytical procedures. Such an approach could establish the foundations for truly open source science where these scientific blueprints form the digital ‘source code’ for a supply chain of high-quality innovations and discoveries. Portland Press Ltd. 2018-12-21 2018-12-21 /pmc/articles/PMC7289030/ /pubmed/33530672 http://dx.doi.org/10.1042/ETLS20180165 Text en © 2018 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article published by Portland Press Limited on behalf of the Biochemical Society and the Royal Society of Biology and distributed under the Creative Commons Attribution License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) .
spellingShingle Perspective
Jennings-Antipov, Laura D.
Gardner, Timothy S.
Digital publishing isn't enough: the case for ‘blueprints’ in scientific communication
title Digital publishing isn't enough: the case for ‘blueprints’ in scientific communication
title_full Digital publishing isn't enough: the case for ‘blueprints’ in scientific communication
title_fullStr Digital publishing isn't enough: the case for ‘blueprints’ in scientific communication
title_full_unstemmed Digital publishing isn't enough: the case for ‘blueprints’ in scientific communication
title_short Digital publishing isn't enough: the case for ‘blueprints’ in scientific communication
title_sort digital publishing isn't enough: the case for ‘blueprints’ in scientific communication
topic Perspective
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7289030/
https://www.ncbi.nlm.nih.gov/pubmed/33530672
http://dx.doi.org/10.1042/ETLS20180165
work_keys_str_mv AT jenningsantipovlaurad digitalpublishingisntenoughthecaseforblueprintsinscientificcommunication
AT gardnertimothys digitalpublishingisntenoughthecaseforblueprintsinscientificcommunication