Cargando…

Radiomic Features of Multiparametric MRI Present Stable Associations With Analogous Histological Features in Patients With Brain Cancer

Magnetic resonance (MR)-derived radiomic features have shown substantial predictive utility in modeling different prognostic factors of glioblastoma and other brain cancers. However, the biological relationship underpinning these predictive models has been largely unstudied, and the generalizability...

Descripción completa

Detalles Bibliográficos
Autores principales: Bobholz, Samuel A., Lowman, Allison K., Barrington, Alexander, Brehler, Michael, McGarry, Sean, Cochran, Elizabeth J., Connelly, Jennifer, Mueller, Wade M., Agarwal, Mohit, O'Neill, Darren, Nencka, Andrew S., Banerjee, Anjishnu, LaViolette, Peter S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Grapho Publications, LLC 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7289245/
https://www.ncbi.nlm.nih.gov/pubmed/32548292
http://dx.doi.org/10.18383/j.tom.2019.00029
_version_ 1783545423883927552
author Bobholz, Samuel A.
Lowman, Allison K.
Barrington, Alexander
Brehler, Michael
McGarry, Sean
Cochran, Elizabeth J.
Connelly, Jennifer
Mueller, Wade M.
Agarwal, Mohit
O'Neill, Darren
Nencka, Andrew S.
Banerjee, Anjishnu
LaViolette, Peter S.
author_facet Bobholz, Samuel A.
Lowman, Allison K.
Barrington, Alexander
Brehler, Michael
McGarry, Sean
Cochran, Elizabeth J.
Connelly, Jennifer
Mueller, Wade M.
Agarwal, Mohit
O'Neill, Darren
Nencka, Andrew S.
Banerjee, Anjishnu
LaViolette, Peter S.
author_sort Bobholz, Samuel A.
collection PubMed
description Magnetic resonance (MR)-derived radiomic features have shown substantial predictive utility in modeling different prognostic factors of glioblastoma and other brain cancers. However, the biological relationship underpinning these predictive models has been largely unstudied, and the generalizability of these models had been called into question. Here, we examine the localized relationship between MR-derived radiomic features and histology-derived “histomic” features using a data set of 16 patients with brain cancer. Tile-based radiomic features were collected on T1, post-contrast T1, FLAIR, and diffusion-weighted imaging (DWI)-derived apparent diffusion coefficient (ADC) images acquired before patient death, with analogous histomic features collected for autopsy samples coregistered to the magnetic resonance imaging. Features were collected for each original image, as well as a 3D wavelet decomposition of each image, resulting in 837 features per MR and histology image. Correlative analyses were used to assess the degree of association between radiomic–histomic pairs for each magnetic resonance imaging. The influence of several confounds was also assessed using linear mixed-effect models for the normalized radiomic–histomic distance, testing for main effects of different acquisition field strengths. Results as a whole were largely heterogeneous, but several features showed substantial associations with their histomic analogs, particularly those derived from the FLAIR and postcontrast T1W images. These features with the strongest association typically presented as stable across field strengths as well. These data suggest that a subset of radiomic features can consistently capture texture information on underlying tissue histology.
format Online
Article
Text
id pubmed-7289245
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Grapho Publications, LLC
record_format MEDLINE/PubMed
spelling pubmed-72892452020-06-15 Radiomic Features of Multiparametric MRI Present Stable Associations With Analogous Histological Features in Patients With Brain Cancer Bobholz, Samuel A. Lowman, Allison K. Barrington, Alexander Brehler, Michael McGarry, Sean Cochran, Elizabeth J. Connelly, Jennifer Mueller, Wade M. Agarwal, Mohit O'Neill, Darren Nencka, Andrew S. Banerjee, Anjishnu LaViolette, Peter S. Tomography Research Articles Magnetic resonance (MR)-derived radiomic features have shown substantial predictive utility in modeling different prognostic factors of glioblastoma and other brain cancers. However, the biological relationship underpinning these predictive models has been largely unstudied, and the generalizability of these models had been called into question. Here, we examine the localized relationship between MR-derived radiomic features and histology-derived “histomic” features using a data set of 16 patients with brain cancer. Tile-based radiomic features were collected on T1, post-contrast T1, FLAIR, and diffusion-weighted imaging (DWI)-derived apparent diffusion coefficient (ADC) images acquired before patient death, with analogous histomic features collected for autopsy samples coregistered to the magnetic resonance imaging. Features were collected for each original image, as well as a 3D wavelet decomposition of each image, resulting in 837 features per MR and histology image. Correlative analyses were used to assess the degree of association between radiomic–histomic pairs for each magnetic resonance imaging. The influence of several confounds was also assessed using linear mixed-effect models for the normalized radiomic–histomic distance, testing for main effects of different acquisition field strengths. Results as a whole were largely heterogeneous, but several features showed substantial associations with their histomic analogs, particularly those derived from the FLAIR and postcontrast T1W images. These features with the strongest association typically presented as stable across field strengths as well. These data suggest that a subset of radiomic features can consistently capture texture information on underlying tissue histology. Grapho Publications, LLC 2020-06 /pmc/articles/PMC7289245/ /pubmed/32548292 http://dx.doi.org/10.18383/j.tom.2019.00029 Text en © 2020 The Authors. Published by Grapho Publications, LLC http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Articles
Bobholz, Samuel A.
Lowman, Allison K.
Barrington, Alexander
Brehler, Michael
McGarry, Sean
Cochran, Elizabeth J.
Connelly, Jennifer
Mueller, Wade M.
Agarwal, Mohit
O'Neill, Darren
Nencka, Andrew S.
Banerjee, Anjishnu
LaViolette, Peter S.
Radiomic Features of Multiparametric MRI Present Stable Associations With Analogous Histological Features in Patients With Brain Cancer
title Radiomic Features of Multiparametric MRI Present Stable Associations With Analogous Histological Features in Patients With Brain Cancer
title_full Radiomic Features of Multiparametric MRI Present Stable Associations With Analogous Histological Features in Patients With Brain Cancer
title_fullStr Radiomic Features of Multiparametric MRI Present Stable Associations With Analogous Histological Features in Patients With Brain Cancer
title_full_unstemmed Radiomic Features of Multiparametric MRI Present Stable Associations With Analogous Histological Features in Patients With Brain Cancer
title_short Radiomic Features of Multiparametric MRI Present Stable Associations With Analogous Histological Features in Patients With Brain Cancer
title_sort radiomic features of multiparametric mri present stable associations with analogous histological features in patients with brain cancer
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7289245/
https://www.ncbi.nlm.nih.gov/pubmed/32548292
http://dx.doi.org/10.18383/j.tom.2019.00029
work_keys_str_mv AT bobholzsamuela radiomicfeaturesofmultiparametricmripresentstableassociationswithanalogoushistologicalfeaturesinpatientswithbraincancer
AT lowmanallisonk radiomicfeaturesofmultiparametricmripresentstableassociationswithanalogoushistologicalfeaturesinpatientswithbraincancer
AT barringtonalexander radiomicfeaturesofmultiparametricmripresentstableassociationswithanalogoushistologicalfeaturesinpatientswithbraincancer
AT brehlermichael radiomicfeaturesofmultiparametricmripresentstableassociationswithanalogoushistologicalfeaturesinpatientswithbraincancer
AT mcgarrysean radiomicfeaturesofmultiparametricmripresentstableassociationswithanalogoushistologicalfeaturesinpatientswithbraincancer
AT cochranelizabethj radiomicfeaturesofmultiparametricmripresentstableassociationswithanalogoushistologicalfeaturesinpatientswithbraincancer
AT connellyjennifer radiomicfeaturesofmultiparametricmripresentstableassociationswithanalogoushistologicalfeaturesinpatientswithbraincancer
AT muellerwadem radiomicfeaturesofmultiparametricmripresentstableassociationswithanalogoushistologicalfeaturesinpatientswithbraincancer
AT agarwalmohit radiomicfeaturesofmultiparametricmripresentstableassociationswithanalogoushistologicalfeaturesinpatientswithbraincancer
AT oneilldarren radiomicfeaturesofmultiparametricmripresentstableassociationswithanalogoushistologicalfeaturesinpatientswithbraincancer
AT nenckaandrews radiomicfeaturesofmultiparametricmripresentstableassociationswithanalogoushistologicalfeaturesinpatientswithbraincancer
AT banerjeeanjishnu radiomicfeaturesofmultiparametricmripresentstableassociationswithanalogoushistologicalfeaturesinpatientswithbraincancer
AT laviolettepeters radiomicfeaturesofmultiparametricmripresentstableassociationswithanalogoushistologicalfeaturesinpatientswithbraincancer