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Radiomic Features of Multiparametric MRI Present Stable Associations With Analogous Histological Features in Patients With Brain Cancer
Magnetic resonance (MR)-derived radiomic features have shown substantial predictive utility in modeling different prognostic factors of glioblastoma and other brain cancers. However, the biological relationship underpinning these predictive models has been largely unstudied, and the generalizability...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Grapho Publications, LLC
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7289245/ https://www.ncbi.nlm.nih.gov/pubmed/32548292 http://dx.doi.org/10.18383/j.tom.2019.00029 |
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author | Bobholz, Samuel A. Lowman, Allison K. Barrington, Alexander Brehler, Michael McGarry, Sean Cochran, Elizabeth J. Connelly, Jennifer Mueller, Wade M. Agarwal, Mohit O'Neill, Darren Nencka, Andrew S. Banerjee, Anjishnu LaViolette, Peter S. |
author_facet | Bobholz, Samuel A. Lowman, Allison K. Barrington, Alexander Brehler, Michael McGarry, Sean Cochran, Elizabeth J. Connelly, Jennifer Mueller, Wade M. Agarwal, Mohit O'Neill, Darren Nencka, Andrew S. Banerjee, Anjishnu LaViolette, Peter S. |
author_sort | Bobholz, Samuel A. |
collection | PubMed |
description | Magnetic resonance (MR)-derived radiomic features have shown substantial predictive utility in modeling different prognostic factors of glioblastoma and other brain cancers. However, the biological relationship underpinning these predictive models has been largely unstudied, and the generalizability of these models had been called into question. Here, we examine the localized relationship between MR-derived radiomic features and histology-derived “histomic” features using a data set of 16 patients with brain cancer. Tile-based radiomic features were collected on T1, post-contrast T1, FLAIR, and diffusion-weighted imaging (DWI)-derived apparent diffusion coefficient (ADC) images acquired before patient death, with analogous histomic features collected for autopsy samples coregistered to the magnetic resonance imaging. Features were collected for each original image, as well as a 3D wavelet decomposition of each image, resulting in 837 features per MR and histology image. Correlative analyses were used to assess the degree of association between radiomic–histomic pairs for each magnetic resonance imaging. The influence of several confounds was also assessed using linear mixed-effect models for the normalized radiomic–histomic distance, testing for main effects of different acquisition field strengths. Results as a whole were largely heterogeneous, but several features showed substantial associations with their histomic analogs, particularly those derived from the FLAIR and postcontrast T1W images. These features with the strongest association typically presented as stable across field strengths as well. These data suggest that a subset of radiomic features can consistently capture texture information on underlying tissue histology. |
format | Online Article Text |
id | pubmed-7289245 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Grapho Publications, LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-72892452020-06-15 Radiomic Features of Multiparametric MRI Present Stable Associations With Analogous Histological Features in Patients With Brain Cancer Bobholz, Samuel A. Lowman, Allison K. Barrington, Alexander Brehler, Michael McGarry, Sean Cochran, Elizabeth J. Connelly, Jennifer Mueller, Wade M. Agarwal, Mohit O'Neill, Darren Nencka, Andrew S. Banerjee, Anjishnu LaViolette, Peter S. Tomography Research Articles Magnetic resonance (MR)-derived radiomic features have shown substantial predictive utility in modeling different prognostic factors of glioblastoma and other brain cancers. However, the biological relationship underpinning these predictive models has been largely unstudied, and the generalizability of these models had been called into question. Here, we examine the localized relationship between MR-derived radiomic features and histology-derived “histomic” features using a data set of 16 patients with brain cancer. Tile-based radiomic features were collected on T1, post-contrast T1, FLAIR, and diffusion-weighted imaging (DWI)-derived apparent diffusion coefficient (ADC) images acquired before patient death, with analogous histomic features collected for autopsy samples coregistered to the magnetic resonance imaging. Features were collected for each original image, as well as a 3D wavelet decomposition of each image, resulting in 837 features per MR and histology image. Correlative analyses were used to assess the degree of association between radiomic–histomic pairs for each magnetic resonance imaging. The influence of several confounds was also assessed using linear mixed-effect models for the normalized radiomic–histomic distance, testing for main effects of different acquisition field strengths. Results as a whole were largely heterogeneous, but several features showed substantial associations with their histomic analogs, particularly those derived from the FLAIR and postcontrast T1W images. These features with the strongest association typically presented as stable across field strengths as well. These data suggest that a subset of radiomic features can consistently capture texture information on underlying tissue histology. Grapho Publications, LLC 2020-06 /pmc/articles/PMC7289245/ /pubmed/32548292 http://dx.doi.org/10.18383/j.tom.2019.00029 Text en © 2020 The Authors. Published by Grapho Publications, LLC http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Articles Bobholz, Samuel A. Lowman, Allison K. Barrington, Alexander Brehler, Michael McGarry, Sean Cochran, Elizabeth J. Connelly, Jennifer Mueller, Wade M. Agarwal, Mohit O'Neill, Darren Nencka, Andrew S. Banerjee, Anjishnu LaViolette, Peter S. Radiomic Features of Multiparametric MRI Present Stable Associations With Analogous Histological Features in Patients With Brain Cancer |
title | Radiomic Features of Multiparametric MRI Present Stable Associations With Analogous Histological Features in Patients With Brain Cancer |
title_full | Radiomic Features of Multiparametric MRI Present Stable Associations With Analogous Histological Features in Patients With Brain Cancer |
title_fullStr | Radiomic Features of Multiparametric MRI Present Stable Associations With Analogous Histological Features in Patients With Brain Cancer |
title_full_unstemmed | Radiomic Features of Multiparametric MRI Present Stable Associations With Analogous Histological Features in Patients With Brain Cancer |
title_short | Radiomic Features of Multiparametric MRI Present Stable Associations With Analogous Histological Features in Patients With Brain Cancer |
title_sort | radiomic features of multiparametric mri present stable associations with analogous histological features in patients with brain cancer |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7289245/ https://www.ncbi.nlm.nih.gov/pubmed/32548292 http://dx.doi.org/10.18383/j.tom.2019.00029 |
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