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A novel drug repurposing approach for non-small cell lung cancer using deep learning

Drug repurposing is an attractive and pragmatic way offering reduced risks and development time in the complicated process of drug discovery. In the past, drug repurposing has been largely accidental and serendipitous. The most successful examples so far have not involved a systematic approach. Nowa...

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Detalles Bibliográficos
Autores principales: Li, Bingrui, Dai, Chan, Wang, Lijun, Deng, Hailong, Li, Yingying, Guan, Zheng, Ni, Haihong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7289363/
https://www.ncbi.nlm.nih.gov/pubmed/32525938
http://dx.doi.org/10.1371/journal.pone.0233112
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author Li, Bingrui
Dai, Chan
Wang, Lijun
Deng, Hailong
Li, Yingying
Guan, Zheng
Ni, Haihong
author_facet Li, Bingrui
Dai, Chan
Wang, Lijun
Deng, Hailong
Li, Yingying
Guan, Zheng
Ni, Haihong
author_sort Li, Bingrui
collection PubMed
description Drug repurposing is an attractive and pragmatic way offering reduced risks and development time in the complicated process of drug discovery. In the past, drug repurposing has been largely accidental and serendipitous. The most successful examples so far have not involved a systematic approach. Nowadays, remarkable advances in drugs, diseases and bioinformatic knowledge are offering great opportunities for designing novel drug repurposing approach through comprehensive understanding of drug information. In this study, we introduced a novel drug repurposing approach based on transcriptomic data and chemical structures using deep learning. One strong candidate for repurposing has been identified. Pimozide is an anti-dyskinesia agent that is used for the suppression of motor and phonic tics in patients with Tourette’s Disorder. However, our pipeline proposed it as a strong candidate for treating non-small cell lung cancer. The cytotoxicity of pimozide against A549 cell lines has been validated.
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spelling pubmed-72893632020-06-15 A novel drug repurposing approach for non-small cell lung cancer using deep learning Li, Bingrui Dai, Chan Wang, Lijun Deng, Hailong Li, Yingying Guan, Zheng Ni, Haihong PLoS One Research Article Drug repurposing is an attractive and pragmatic way offering reduced risks and development time in the complicated process of drug discovery. In the past, drug repurposing has been largely accidental and serendipitous. The most successful examples so far have not involved a systematic approach. Nowadays, remarkable advances in drugs, diseases and bioinformatic knowledge are offering great opportunities for designing novel drug repurposing approach through comprehensive understanding of drug information. In this study, we introduced a novel drug repurposing approach based on transcriptomic data and chemical structures using deep learning. One strong candidate for repurposing has been identified. Pimozide is an anti-dyskinesia agent that is used for the suppression of motor and phonic tics in patients with Tourette’s Disorder. However, our pipeline proposed it as a strong candidate for treating non-small cell lung cancer. The cytotoxicity of pimozide against A549 cell lines has been validated. Public Library of Science 2020-06-11 /pmc/articles/PMC7289363/ /pubmed/32525938 http://dx.doi.org/10.1371/journal.pone.0233112 Text en © 2020 Li et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Li, Bingrui
Dai, Chan
Wang, Lijun
Deng, Hailong
Li, Yingying
Guan, Zheng
Ni, Haihong
A novel drug repurposing approach for non-small cell lung cancer using deep learning
title A novel drug repurposing approach for non-small cell lung cancer using deep learning
title_full A novel drug repurposing approach for non-small cell lung cancer using deep learning
title_fullStr A novel drug repurposing approach for non-small cell lung cancer using deep learning
title_full_unstemmed A novel drug repurposing approach for non-small cell lung cancer using deep learning
title_short A novel drug repurposing approach for non-small cell lung cancer using deep learning
title_sort novel drug repurposing approach for non-small cell lung cancer using deep learning
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7289363/
https://www.ncbi.nlm.nih.gov/pubmed/32525938
http://dx.doi.org/10.1371/journal.pone.0233112
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