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Outcomes in oncogenic-addicted advanced NSCLC patients with actionable mutations identified by liquid biopsy genomic profiling using a tagged amplicon-based NGS assay

Circulating tumor DNA (ctDNA)-based molecular profiling is rapidly gaining traction in clinical practice of advanced cancer patients with multi-gene next-generation sequencing (NGS) panels. However, clinical outcomes remain poorly described and deserve further validation with personalized treatment...

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Autores principales: Remon, Jordi, Swalduz, Aurelie, Planchard, David, Ortiz-Cuaran, Sandra, Mezquita, Laura, Lacroix, Ludovic, Jovelet, Cecile, Rouleau, Etienne, Leonce, Camille, De Kievit, Frank, Morris, Clive, Jones, Greg, Mercier, Kelly, Howarth, Karen, Green, Emma, Pérol, Maurice, Saintigny, Pierre, Besse, Benjamin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7289417/
https://www.ncbi.nlm.nih.gov/pubmed/32525942
http://dx.doi.org/10.1371/journal.pone.0234302
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author Remon, Jordi
Swalduz, Aurelie
Planchard, David
Ortiz-Cuaran, Sandra
Mezquita, Laura
Lacroix, Ludovic
Jovelet, Cecile
Rouleau, Etienne
Leonce, Camille
De Kievit, Frank
Morris, Clive
Jones, Greg
Mercier, Kelly
Howarth, Karen
Green, Emma
Pérol, Maurice
Saintigny, Pierre
Besse, Benjamin
author_facet Remon, Jordi
Swalduz, Aurelie
Planchard, David
Ortiz-Cuaran, Sandra
Mezquita, Laura
Lacroix, Ludovic
Jovelet, Cecile
Rouleau, Etienne
Leonce, Camille
De Kievit, Frank
Morris, Clive
Jones, Greg
Mercier, Kelly
Howarth, Karen
Green, Emma
Pérol, Maurice
Saintigny, Pierre
Besse, Benjamin
author_sort Remon, Jordi
collection PubMed
description Circulating tumor DNA (ctDNA)-based molecular profiling is rapidly gaining traction in clinical practice of advanced cancer patients with multi-gene next-generation sequencing (NGS) panels. However, clinical outcomes remain poorly described and deserve further validation with personalized treatment of patients with genomic alterations detected in plasma ctDNA. Here, we describe the outcomes, disease control rate (DCR) at 3 months and progression-free survival (PFS) in oncogenic-addicted advanced NSCLC patients with actionable alterations identified in plasma by ctDNA liquid biopsy assay, InVisionFirst®-Lung. A pooled retrospective analysis was completed of 81 advanced NSCLC patients with all classes of alterations predicting response to current FDA approved drugs: sensitizing common EGFR mutations (78%, n = 63) with T790M (73%, 46/63), ALK / ROS1 gene fusions (17%, n = 14) and BRAF V600E mutations (5%, n = 4). Actionable driver alterations detected in liquid biopsy were confirmed by prior tissue genomic profiling in all patients, and all patients received personalized treatment. Of 82 patients treated with matched targeted therapies, 10% were at first-line, 41% at second-line, and 49% beyond second-line. Acquired T790M at TKI relapse was detected in 73% (46/63) of patients, and all prospective patients (34/46) initiated osimertinib treatment based on ctDNA results. The 3-month DCR was 86% in 81 evaluable patients. The median PFS was of 14.8 months (12.1–22.9m). Baseline ctDNA allelic fraction of genomic driver did not correlate with the response rate of personalized treatment (p = 0.29). ctDNA molecular profiling is an accurate and reliable tool for the detection of clinically relevant molecular alterations in advanced NSCLC patients. Clinical outcomes with targeted therapies endorse the use of liquid biopsy by amplicon-based NGS ctDNA analysis in first line and relapse testing for advanced NSCLC patients.
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spelling pubmed-72894172020-06-15 Outcomes in oncogenic-addicted advanced NSCLC patients with actionable mutations identified by liquid biopsy genomic profiling using a tagged amplicon-based NGS assay Remon, Jordi Swalduz, Aurelie Planchard, David Ortiz-Cuaran, Sandra Mezquita, Laura Lacroix, Ludovic Jovelet, Cecile Rouleau, Etienne Leonce, Camille De Kievit, Frank Morris, Clive Jones, Greg Mercier, Kelly Howarth, Karen Green, Emma Pérol, Maurice Saintigny, Pierre Besse, Benjamin PLoS One Research Article Circulating tumor DNA (ctDNA)-based molecular profiling is rapidly gaining traction in clinical practice of advanced cancer patients with multi-gene next-generation sequencing (NGS) panels. However, clinical outcomes remain poorly described and deserve further validation with personalized treatment of patients with genomic alterations detected in plasma ctDNA. Here, we describe the outcomes, disease control rate (DCR) at 3 months and progression-free survival (PFS) in oncogenic-addicted advanced NSCLC patients with actionable alterations identified in plasma by ctDNA liquid biopsy assay, InVisionFirst®-Lung. A pooled retrospective analysis was completed of 81 advanced NSCLC patients with all classes of alterations predicting response to current FDA approved drugs: sensitizing common EGFR mutations (78%, n = 63) with T790M (73%, 46/63), ALK / ROS1 gene fusions (17%, n = 14) and BRAF V600E mutations (5%, n = 4). Actionable driver alterations detected in liquid biopsy were confirmed by prior tissue genomic profiling in all patients, and all patients received personalized treatment. Of 82 patients treated with matched targeted therapies, 10% were at first-line, 41% at second-line, and 49% beyond second-line. Acquired T790M at TKI relapse was detected in 73% (46/63) of patients, and all prospective patients (34/46) initiated osimertinib treatment based on ctDNA results. The 3-month DCR was 86% in 81 evaluable patients. The median PFS was of 14.8 months (12.1–22.9m). Baseline ctDNA allelic fraction of genomic driver did not correlate with the response rate of personalized treatment (p = 0.29). ctDNA molecular profiling is an accurate and reliable tool for the detection of clinically relevant molecular alterations in advanced NSCLC patients. Clinical outcomes with targeted therapies endorse the use of liquid biopsy by amplicon-based NGS ctDNA analysis in first line and relapse testing for advanced NSCLC patients. Public Library of Science 2020-06-11 /pmc/articles/PMC7289417/ /pubmed/32525942 http://dx.doi.org/10.1371/journal.pone.0234302 Text en © 2020 Remon et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Remon, Jordi
Swalduz, Aurelie
Planchard, David
Ortiz-Cuaran, Sandra
Mezquita, Laura
Lacroix, Ludovic
Jovelet, Cecile
Rouleau, Etienne
Leonce, Camille
De Kievit, Frank
Morris, Clive
Jones, Greg
Mercier, Kelly
Howarth, Karen
Green, Emma
Pérol, Maurice
Saintigny, Pierre
Besse, Benjamin
Outcomes in oncogenic-addicted advanced NSCLC patients with actionable mutations identified by liquid biopsy genomic profiling using a tagged amplicon-based NGS assay
title Outcomes in oncogenic-addicted advanced NSCLC patients with actionable mutations identified by liquid biopsy genomic profiling using a tagged amplicon-based NGS assay
title_full Outcomes in oncogenic-addicted advanced NSCLC patients with actionable mutations identified by liquid biopsy genomic profiling using a tagged amplicon-based NGS assay
title_fullStr Outcomes in oncogenic-addicted advanced NSCLC patients with actionable mutations identified by liquid biopsy genomic profiling using a tagged amplicon-based NGS assay
title_full_unstemmed Outcomes in oncogenic-addicted advanced NSCLC patients with actionable mutations identified by liquid biopsy genomic profiling using a tagged amplicon-based NGS assay
title_short Outcomes in oncogenic-addicted advanced NSCLC patients with actionable mutations identified by liquid biopsy genomic profiling using a tagged amplicon-based NGS assay
title_sort outcomes in oncogenic-addicted advanced nsclc patients with actionable mutations identified by liquid biopsy genomic profiling using a tagged amplicon-based ngs assay
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7289417/
https://www.ncbi.nlm.nih.gov/pubmed/32525942
http://dx.doi.org/10.1371/journal.pone.0234302
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