Cargando…

A systematic review of machine learning models for predicting outcomes of stroke with structured data

BACKGROUND AND PURPOSE: Machine learning (ML) has attracted much attention with the hope that it could make use of large, routinely collected datasets and deliver accurate personalised prognosis. The aim of this systematic review is to identify and critically appraise the reporting and developing of...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, Wenjuan, Kiik, Martin, Peek, Niels, Curcin, Vasa, Marshall, Iain J., Rudd, Anthony G., Wang, Yanzhong, Douiri, Abdel, Wolfe, Charles D., Bray, Benjamin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7292406/
https://www.ncbi.nlm.nih.gov/pubmed/32530947
http://dx.doi.org/10.1371/journal.pone.0234722
_version_ 1783546107487322112
author Wang, Wenjuan
Kiik, Martin
Peek, Niels
Curcin, Vasa
Marshall, Iain J.
Rudd, Anthony G.
Wang, Yanzhong
Douiri, Abdel
Wolfe, Charles D.
Bray, Benjamin
author_facet Wang, Wenjuan
Kiik, Martin
Peek, Niels
Curcin, Vasa
Marshall, Iain J.
Rudd, Anthony G.
Wang, Yanzhong
Douiri, Abdel
Wolfe, Charles D.
Bray, Benjamin
author_sort Wang, Wenjuan
collection PubMed
description BACKGROUND AND PURPOSE: Machine learning (ML) has attracted much attention with the hope that it could make use of large, routinely collected datasets and deliver accurate personalised prognosis. The aim of this systematic review is to identify and critically appraise the reporting and developing of ML models for predicting outcomes after stroke. METHODS: We searched PubMed and Web of Science from 1990 to March 2019, using previously published search filters for stroke, ML, and prediction models. We focused on structured clinical data, excluding image and text analysis. This review was registered with PROSPERO (CRD42019127154). RESULTS: Eighteen studies were eligible for inclusion. Most studies reported less than half of the terms in the reporting quality checklist. The most frequently predicted stroke outcomes were mortality (7 studies) and functional outcome (5 studies). The most commonly used ML methods were random forests (9 studies), support vector machines (8 studies), decision trees (6 studies), and neural networks (6 studies). The median sample size was 475 (range 70–3184), with a median of 22 predictors (range 4–152) considered. All studies evaluated discrimination with thirteen using area under the ROC curve whilst calibration was assessed in three. Two studies performed external validation. None described the final model sufficiently well to reproduce it. CONCLUSIONS: The use of ML for predicting stroke outcomes is increasing. However, few met basic reporting standards for clinical prediction tools and none made their models available in a way which could be used or evaluated. Major improvements in ML study conduct and reporting are needed before it can meaningfully be considered for practice.
format Online
Article
Text
id pubmed-7292406
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-72924062020-06-18 A systematic review of machine learning models for predicting outcomes of stroke with structured data Wang, Wenjuan Kiik, Martin Peek, Niels Curcin, Vasa Marshall, Iain J. Rudd, Anthony G. Wang, Yanzhong Douiri, Abdel Wolfe, Charles D. Bray, Benjamin PLoS One Research Article BACKGROUND AND PURPOSE: Machine learning (ML) has attracted much attention with the hope that it could make use of large, routinely collected datasets and deliver accurate personalised prognosis. The aim of this systematic review is to identify and critically appraise the reporting and developing of ML models for predicting outcomes after stroke. METHODS: We searched PubMed and Web of Science from 1990 to March 2019, using previously published search filters for stroke, ML, and prediction models. We focused on structured clinical data, excluding image and text analysis. This review was registered with PROSPERO (CRD42019127154). RESULTS: Eighteen studies were eligible for inclusion. Most studies reported less than half of the terms in the reporting quality checklist. The most frequently predicted stroke outcomes were mortality (7 studies) and functional outcome (5 studies). The most commonly used ML methods were random forests (9 studies), support vector machines (8 studies), decision trees (6 studies), and neural networks (6 studies). The median sample size was 475 (range 70–3184), with a median of 22 predictors (range 4–152) considered. All studies evaluated discrimination with thirteen using area under the ROC curve whilst calibration was assessed in three. Two studies performed external validation. None described the final model sufficiently well to reproduce it. CONCLUSIONS: The use of ML for predicting stroke outcomes is increasing. However, few met basic reporting standards for clinical prediction tools and none made their models available in a way which could be used or evaluated. Major improvements in ML study conduct and reporting are needed before it can meaningfully be considered for practice. Public Library of Science 2020-06-12 /pmc/articles/PMC7292406/ /pubmed/32530947 http://dx.doi.org/10.1371/journal.pone.0234722 Text en © 2020 Wang et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Wang, Wenjuan
Kiik, Martin
Peek, Niels
Curcin, Vasa
Marshall, Iain J.
Rudd, Anthony G.
Wang, Yanzhong
Douiri, Abdel
Wolfe, Charles D.
Bray, Benjamin
A systematic review of machine learning models for predicting outcomes of stroke with structured data
title A systematic review of machine learning models for predicting outcomes of stroke with structured data
title_full A systematic review of machine learning models for predicting outcomes of stroke with structured data
title_fullStr A systematic review of machine learning models for predicting outcomes of stroke with structured data
title_full_unstemmed A systematic review of machine learning models for predicting outcomes of stroke with structured data
title_short A systematic review of machine learning models for predicting outcomes of stroke with structured data
title_sort systematic review of machine learning models for predicting outcomes of stroke with structured data
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7292406/
https://www.ncbi.nlm.nih.gov/pubmed/32530947
http://dx.doi.org/10.1371/journal.pone.0234722
work_keys_str_mv AT wangwenjuan asystematicreviewofmachinelearningmodelsforpredictingoutcomesofstrokewithstructureddata
AT kiikmartin asystematicreviewofmachinelearningmodelsforpredictingoutcomesofstrokewithstructureddata
AT peekniels asystematicreviewofmachinelearningmodelsforpredictingoutcomesofstrokewithstructureddata
AT curcinvasa asystematicreviewofmachinelearningmodelsforpredictingoutcomesofstrokewithstructureddata
AT marshalliainj asystematicreviewofmachinelearningmodelsforpredictingoutcomesofstrokewithstructureddata
AT ruddanthonyg asystematicreviewofmachinelearningmodelsforpredictingoutcomesofstrokewithstructureddata
AT wangyanzhong asystematicreviewofmachinelearningmodelsforpredictingoutcomesofstrokewithstructureddata
AT douiriabdel asystematicreviewofmachinelearningmodelsforpredictingoutcomesofstrokewithstructureddata
AT wolfecharlesd asystematicreviewofmachinelearningmodelsforpredictingoutcomesofstrokewithstructureddata
AT braybenjamin asystematicreviewofmachinelearningmodelsforpredictingoutcomesofstrokewithstructureddata
AT wangwenjuan systematicreviewofmachinelearningmodelsforpredictingoutcomesofstrokewithstructureddata
AT kiikmartin systematicreviewofmachinelearningmodelsforpredictingoutcomesofstrokewithstructureddata
AT peekniels systematicreviewofmachinelearningmodelsforpredictingoutcomesofstrokewithstructureddata
AT curcinvasa systematicreviewofmachinelearningmodelsforpredictingoutcomesofstrokewithstructureddata
AT marshalliainj systematicreviewofmachinelearningmodelsforpredictingoutcomesofstrokewithstructureddata
AT ruddanthonyg systematicreviewofmachinelearningmodelsforpredictingoutcomesofstrokewithstructureddata
AT wangyanzhong systematicreviewofmachinelearningmodelsforpredictingoutcomesofstrokewithstructureddata
AT douiriabdel systematicreviewofmachinelearningmodelsforpredictingoutcomesofstrokewithstructureddata
AT wolfecharlesd systematicreviewofmachinelearningmodelsforpredictingoutcomesofstrokewithstructureddata
AT braybenjamin systematicreviewofmachinelearningmodelsforpredictingoutcomesofstrokewithstructureddata