Cargando…

Identification of key genes and modules in response to Cadmium stress in different rice varieties and stem nodes by weighted gene co-expression network analysis

Soil cadmium (Cd) pollution threatens food safety. This study aimed to identify genes related to Cd accumulation in rice. Low- (Shennong 315, short for S315) and high- (Shendao 47, short for S47) Cd-accumulative rice cultivars were incubated with CdCl(2)·2.5H(2)O. RNA-seq and weighted gene co-expres...

Descripción completa

Detalles Bibliográficos
Autores principales:	Wang, Qi, Zeng, Xiannan, Song, Qiulai, Sun, Yu, Feng, Yanjiang, Lai, Yongcai
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group UK 2020
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7293223/ https://www.ncbi.nlm.nih.gov/pubmed/32533096 http://dx.doi.org/10.1038/s41598-020-66132-4

Ejemplares similares

Combination of Water-Saving Irrigation and Nitrogen Fertilization Regulates Greenhouse Gas Emissions and Increases Rice Yields in High-Cold Regions, Northeast China
por: Sun, Yu, et al.
Publicado: (2022)

Effect of straw retention on carbon footprint under different cropping sequences in Northeast China
por: Song, Qiulai, et al.
Publicado: (2021)

Weighted gene coexpression network analysis-based identification of key modules and hub genes associated with drought sensitivity in rice
por: Yu, Baiyang, et al.
Publicado: (2020)

Transcriptome analysis reveals the roles of stem nodes in cadmium transport to rice grain
por: Liu, Ailing, et al.
Publicado: (2020)

Comparative Responses of Silicon to Reduce Cadmium and Enrich Selenium in Rice Varieties
por: Su, Yang, et al.
Publicado: (2023)

Intelligent Identification and Features Attribution of Saline–Alkali-Tolerant Rice Varieties Based on Raman Spectroscopy
por: Ma, Bo, et al.
Publicado: (2022)

Correction to: Weighted gene coexpression network analysis-based identification of key modules and hub genes associated with drought sensitivity in rice
por: Yu, Baiyang, et al.
Publicado: (2020)

Role of the node in controlling traffic of cadmium, zinc, and manganese in rice
por: Yamaguchi, Noriko, et al.
Publicado: (2012)

The Key Metabolites in Rice Quality Formation of Conventional japonica Varieties
por: Xiong, Qiangqiang, et al.
Publicado: (2023)

Low cadmium (LCD), a novel gene related to cadmium tolerance and accumulation in rice
por: Shimo, Hugo, et al.
Publicado: (2011)

A Node-Expressed Transporter OsCCX2 Is Involved in Grain Cadmium Accumulation of Rice
por: Hao, Xiaohua, et al.
Publicado: (2018)

Validating a segment on chromosome 7 of japonica for establishing low-cadmium accumulating indica rice variety
por: Wang, Kai, et al.
Publicado: (2021)

Identification of Elite R-Gene Combinations against Blast Disease in Geng Rice Varieties
por: Gao, Peng, et al.
Publicado: (2023)

Differences in the response mechanism of cadmium uptake, transfer, and accumulation of different rice varieties after foliar silicon spraying under cadmium-stressed soil
por: Zhao, Junyang, et al.
Publicado: (2023)

Molybdenum Supply Alleviates the Cadmium Toxicity in Fragrant Rice by Modulating Oxidative Stress and Antioxidant Gene Expression
por: Imran, Muhammad, et al.
Publicado: (2020)

Silicon reduces cadmium accumulation by suppressing expression of transporter genes involved in cadmium uptake and translocation in rice
por: Feng Shao, Ji, et al.
Publicado: (2017)

Identification of key module and hub genes in pulpitis using weighted gene co-expression network analysis
por: Zhang, Denghui, et al.
Publicado: (2023)

Association between sequence variants in cadmium-related genes and the cadmium accumulation trait in thermo-sensitive genic male sterile rice
por: Hao, Xiaohua, et al.
Publicado: (2019)

Hydrogen sulfide modulates cadmium-induced physiological and biochemical responses to alleviate cadmium toxicity in rice
por: Mostofa, Mohammad Golam, et al.
Publicado: (2015)

Modulation of Key Physio-Biochemical and Ultrastructural Attributes after Synergistic Application of Zinc and Silicon on Rice under Cadmium Stress
por: Mapodzeke, James Mutemachani, et al.
Publicado: (2021)

Identification of key gene modules and transcription factors for human osteoarthritis by weighted gene co-expression network analysis
por: Gao, Xiang, et al.
Publicado: (2019)

Identification of key gene modules and genes in colorectal cancer by co-expression analysis weighted gene co-expression network analysis
por: Wang, Peng, et al.
Publicado: (2020)

Changes in sucrose metabolism in maize varieties with different cadmium sensitivities under cadmium stress
por: Li, Cong, et al.
Publicado: (2020)

Effective identification of varieties by nucleotide polymorphisms and its application for essentially derived variety identification in rice
por: Yuan, Xiong, et al.
Publicado: (2022)

Nutrient Metabolism Pathways Analysis and Key Candidate Genes Identification Corresponding to Cadmium Stress in Buckwheat through Multiomics Analysis
por: Du, Dengxiang, et al.
Publicado: (2023)

Calcium Plays a Double-Edged Role in Modulating Cadmium Uptake and Translocation in Rice
por: Zhang, Shuo, et al.
Publicado: (2020)

Identification of key modules and driving genes in nonalcoholic fatty liver disease by weighted gene co-expression network analysis
por: Song, Zhengmao, et al.
Publicado: (2023)

Identification of Key Genes for the Ultrahigh Yield of Rice Using Dynamic Cross-tissue Network Analysis
por: Hu, Jihong, et al.
Publicado: (2020)

Gene identification and transcriptome analysis of low cadmium accumulation rice mutant (lcd1) in response to cadmium stress using MutMap and RNA-seq
por: Cao, Zhen Zhen, et al.
Publicado: (2019)

Identification of key genes and pathways associated with cholangiocarcinoma development based on weighted gene correlation network analysis
por: Liu, Jingwei, et al.
Publicado: (2019)

Characterization of rapid intervascular transport of cadmium in rice stem by radioisotope imaging
por: Kobayashi, Natsuko I., et al.
Publicado: (2013)

ECD1 functions as an RNA-editing trans-factor of rps14-149 in plastids and is required for early chloroplast development in seedlings
por: Jiang, Tian, et al.
Publicado: (2018)

Co-expression network analysis of the transcriptomes of rice roots exposed to various cadmium stresses reveals universal cadmium-responsive genes
por: Tan, Mingpu, et al.
Publicado: (2017)

Comparison of anther transcriptomes in response to cold stress at the reproductive stage between susceptible and resistant Japonica rice varieties
por: Guo, Zhenhua, et al.
Publicado: (2022)

Cadmium Absorption in Various Genotypes of Rice under Cadmium Stress
por: Feng, Kaixuan, et al.
Publicado: (2023)

Functional Haplotype and eQTL Analyses of Genes Affecting Cadmium Content in Cultivated Rice
por: Lee, Sang-Beom, et al.
Publicado: (2019)

Identification of Key Modules, Hub Genes, and Noncoding RNAs in Chronic Rhinosinusitis with Nasal Polyps by Weighted Gene Coexpression Network Analysis
por: Zhou, Xuanchen, et al.
Publicado: (2020)

Identification of key modules and prognostic markers in adrenocortical carcinoma by weighted gene co-expression network analysis
por: Zou, Yong, et al.
Publicado: (2019)

Weighted gene co-expression network analysis to identify key modules and hub genes related to hyperlipidaemia
por: Liao, Fu-Jun, et al.
Publicado: (2021)

Identification of key genes associated with the progression of intrahepatic cholangiocarcinoma using weighted gene co-expression network analysis
por: Ye, Zi, et al.
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_m0dvcg138pg6akviq4qjceui8b