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Pre-S Deletions are Predominant Quasispecies in HIV/HBV Infection: Quasispecies Perspective

BACKGROUND: Combined HIV infection can accelerate HBV-induced liver disease. It is known that HBV Pre-S deletion is closely related to HBV-associated terminal liver disease in HBV mono-infection. Currently, data on HBV Pre-S quasispecies feature deletion in HIV/HBV co-infected patients are lacking....

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Autores principales: Nie, Yuan, Deng, Xi-Zi, Lan, Yun, Li, Feng, Hu, Feng-Yu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Dove 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7294102/
https://www.ncbi.nlm.nih.gov/pubmed/32606815
http://dx.doi.org/10.2147/IDR.S255473
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author Nie, Yuan
Deng, Xi-Zi
Lan, Yun
Li, Feng
Hu, Feng-Yu
author_facet Nie, Yuan
Deng, Xi-Zi
Lan, Yun
Li, Feng
Hu, Feng-Yu
author_sort Nie, Yuan
collection PubMed
description BACKGROUND: Combined HIV infection can accelerate HBV-induced liver disease. It is known that HBV Pre-S deletion is closely related to HBV-associated terminal liver disease in HBV mono-infection. Currently, data on HBV Pre-S quasispecies feature deletion in HIV/HBV co-infected patients are lacking. METHODS: The characteristics and blood samples of patients with chronic HBV infection were collected and classified into an HIV/HBV co-infection group and an HBV mono-infection group according to HIV antibody results before treatment. HBV DNA in serum was extracted. The HBV Pre-S region was amplified by nested-PCR and was further T-A cloned. Using the standard sequence of the matched genotype HBV as a reference, BioEdit 7.0 software was employed for sequence alignment. RESULTS: HBV Pre-S regions were successfully amplified from 147 patients, including 71 cases in the HIV/HBV co-infected group and 76 cases in the HBV mono-infected group. The proportion of the HIV/HBV co-infected group with Pre-S quasispecies deletion was lower than that of the HBV mono-infected group. By analyzing the frequency of Pre-S quasispecies in the two groups, the frequency of Pre-S quasispecies in HIV/HBV co-infected patients with Pre-S quasispecies was higher than HBV mono-infected patients. The frequency of Pre-S quasispecies deletion of the S protein promoter region in the HIV/HBV co-infected group was significantly higher than that in the HBV mono-infected group. CONCLUSION: High-frequency Pre-S quasispecies deletions are predominant in HIV/HBV co-infected patients; however, low-frequency Pre-S deletions are predominant in HBV mono-infected patients, providing a reference for the pathogenesis of the accelerated progression of liver disease in HIV/HBV co-infection.
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spelling pubmed-72941022020-06-29 Pre-S Deletions are Predominant Quasispecies in HIV/HBV Infection: Quasispecies Perspective Nie, Yuan Deng, Xi-Zi Lan, Yun Li, Feng Hu, Feng-Yu Infect Drug Resist Short Report BACKGROUND: Combined HIV infection can accelerate HBV-induced liver disease. It is known that HBV Pre-S deletion is closely related to HBV-associated terminal liver disease in HBV mono-infection. Currently, data on HBV Pre-S quasispecies feature deletion in HIV/HBV co-infected patients are lacking. METHODS: The characteristics and blood samples of patients with chronic HBV infection were collected and classified into an HIV/HBV co-infection group and an HBV mono-infection group according to HIV antibody results before treatment. HBV DNA in serum was extracted. The HBV Pre-S region was amplified by nested-PCR and was further T-A cloned. Using the standard sequence of the matched genotype HBV as a reference, BioEdit 7.0 software was employed for sequence alignment. RESULTS: HBV Pre-S regions were successfully amplified from 147 patients, including 71 cases in the HIV/HBV co-infected group and 76 cases in the HBV mono-infected group. The proportion of the HIV/HBV co-infected group with Pre-S quasispecies deletion was lower than that of the HBV mono-infected group. By analyzing the frequency of Pre-S quasispecies in the two groups, the frequency of Pre-S quasispecies in HIV/HBV co-infected patients with Pre-S quasispecies was higher than HBV mono-infected patients. The frequency of Pre-S quasispecies deletion of the S protein promoter region in the HIV/HBV co-infected group was significantly higher than that in the HBV mono-infected group. CONCLUSION: High-frequency Pre-S quasispecies deletions are predominant in HIV/HBV co-infected patients; however, low-frequency Pre-S deletions are predominant in HBV mono-infected patients, providing a reference for the pathogenesis of the accelerated progression of liver disease in HIV/HBV co-infection. Dove 2020-06-08 /pmc/articles/PMC7294102/ /pubmed/32606815 http://dx.doi.org/10.2147/IDR.S255473 Text en © 2020 Nie et al. http://creativecommons.org/licenses/by-nc/3.0/ This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php).
spellingShingle Short Report
Nie, Yuan
Deng, Xi-Zi
Lan, Yun
Li, Feng
Hu, Feng-Yu
Pre-S Deletions are Predominant Quasispecies in HIV/HBV Infection: Quasispecies Perspective
title Pre-S Deletions are Predominant Quasispecies in HIV/HBV Infection: Quasispecies Perspective
title_full Pre-S Deletions are Predominant Quasispecies in HIV/HBV Infection: Quasispecies Perspective
title_fullStr Pre-S Deletions are Predominant Quasispecies in HIV/HBV Infection: Quasispecies Perspective
title_full_unstemmed Pre-S Deletions are Predominant Quasispecies in HIV/HBV Infection: Quasispecies Perspective
title_short Pre-S Deletions are Predominant Quasispecies in HIV/HBV Infection: Quasispecies Perspective
title_sort pre-s deletions are predominant quasispecies in hiv/hbv infection: quasispecies perspective
topic Short Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7294102/
https://www.ncbi.nlm.nih.gov/pubmed/32606815
http://dx.doi.org/10.2147/IDR.S255473
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