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Communication-Aware Hardware-Assisted MPI Overlap Engine
Overlap of computation and communication is critical for good application-level performance. Modern high-performance networks offer Hardware-assisted tag matching and rendezvous offload to enable communication progress without involving the host CPU. However, hardware based offload cannot be used in...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7295353/ http://dx.doi.org/10.1007/978-3-030-50743-5_26 |
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author | Bayatpour, Mohammadreza Hashmi Maqbool, Jahanzeb Chakraborty, Sourav Kandadi Suresh, Kaushik Ghazimirsaeed, Seyedeh Mahdieh Ramesh, Bharath Subramoni, Hari Panda, Dhabaleswar K. |
author_facet | Bayatpour, Mohammadreza Hashmi Maqbool, Jahanzeb Chakraborty, Sourav Kandadi Suresh, Kaushik Ghazimirsaeed, Seyedeh Mahdieh Ramesh, Bharath Subramoni, Hari Panda, Dhabaleswar K. |
author_sort | Bayatpour, Mohammadreza |
collection | PubMed |
description | Overlap of computation and communication is critical for good application-level performance. Modern high-performance networks offer Hardware-assisted tag matching and rendezvous offload to enable communication progress without involving the host CPU. However, hardware based offload cannot be used in many situations due to various hardware limitations and performance issues. Furthermore, hardware-based designs cannot provide good overlap for common communication patterns involving unexpected messages or non-contiguous datatypes. In this paper, we address these limitations by designing a communication-aware overlap engine for MPI that uses novel hardware-assisted and software-based solutions to extract overlap for both expected and unexpected messages. The proposed design adapts to the application’s communication requirements including message size, datatype, and relative timing of processes using heuristics and history-driven predictions. We evaluate the proposed designs against state-of-the-art MPI libraries and show up to 41% and 22% reduction in latency for collective operations and stencil-based application kernels on 1024 and 128 nodes, respectively, as well as 23% improvement in communication performance of the P3DFFT application. |
format | Online Article Text |
id | pubmed-7295353 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
record_format | MEDLINE/PubMed |
spelling | pubmed-72953532020-06-16 Communication-Aware Hardware-Assisted MPI Overlap Engine Bayatpour, Mohammadreza Hashmi Maqbool, Jahanzeb Chakraborty, Sourav Kandadi Suresh, Kaushik Ghazimirsaeed, Seyedeh Mahdieh Ramesh, Bharath Subramoni, Hari Panda, Dhabaleswar K. High Performance Computing Article Overlap of computation and communication is critical for good application-level performance. Modern high-performance networks offer Hardware-assisted tag matching and rendezvous offload to enable communication progress without involving the host CPU. However, hardware based offload cannot be used in many situations due to various hardware limitations and performance issues. Furthermore, hardware-based designs cannot provide good overlap for common communication patterns involving unexpected messages or non-contiguous datatypes. In this paper, we address these limitations by designing a communication-aware overlap engine for MPI that uses novel hardware-assisted and software-based solutions to extract overlap for both expected and unexpected messages. The proposed design adapts to the application’s communication requirements including message size, datatype, and relative timing of processes using heuristics and history-driven predictions. We evaluate the proposed designs against state-of-the-art MPI libraries and show up to 41% and 22% reduction in latency for collective operations and stencil-based application kernels on 1024 and 128 nodes, respectively, as well as 23% improvement in communication performance of the P3DFFT application. 2020-05-22 /pmc/articles/PMC7295353/ http://dx.doi.org/10.1007/978-3-030-50743-5_26 Text en © Springer Nature Switzerland AG 2020 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Article Bayatpour, Mohammadreza Hashmi Maqbool, Jahanzeb Chakraborty, Sourav Kandadi Suresh, Kaushik Ghazimirsaeed, Seyedeh Mahdieh Ramesh, Bharath Subramoni, Hari Panda, Dhabaleswar K. Communication-Aware Hardware-Assisted MPI Overlap Engine |
title | Communication-Aware Hardware-Assisted MPI Overlap Engine |
title_full | Communication-Aware Hardware-Assisted MPI Overlap Engine |
title_fullStr | Communication-Aware Hardware-Assisted MPI Overlap Engine |
title_full_unstemmed | Communication-Aware Hardware-Assisted MPI Overlap Engine |
title_short | Communication-Aware Hardware-Assisted MPI Overlap Engine |
title_sort | communication-aware hardware-assisted mpi overlap engine |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7295353/ http://dx.doi.org/10.1007/978-3-030-50743-5_26 |
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