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Simulations of the 2D self-assembly of tripod-shaped building blocks

We introduce a molecular dynamics (MD) coarse-grained model for the description of tripod building blocks. This model has been used by us already for linear, V-shape, and tetratopic molecules. We wanted to further extend its possibilities to trifunctional molecules to prove its versatility. For the...

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Detalles Bibliográficos
Autores principales: Baran, Łukasz, Rżysko, Wojciech, Słyk, Edyta
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Beilstein-Institut 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7296195/
https://www.ncbi.nlm.nih.gov/pubmed/32566438
http://dx.doi.org/10.3762/bjnano.11.73
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author Baran, Łukasz
Rżysko, Wojciech
Słyk, Edyta
author_facet Baran, Łukasz
Rżysko, Wojciech
Słyk, Edyta
author_sort Baran, Łukasz
collection PubMed
description We introduce a molecular dynamics (MD) coarse-grained model for the description of tripod building blocks. This model has been used by us already for linear, V-shape, and tetratopic molecules. We wanted to further extend its possibilities to trifunctional molecules to prove its versatility. For the chosen systems we have also compared the MD results with Monte Carlo results on a triangular lattice. We have shown that the constraints present in the latter method can enforce the formation of completely different structures, not reproducible with off-lattice simulations. In addition to that, we have characterized the obtained structures regarding various parameters such as theoretical diffraction pattern and average association number.
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spelling pubmed-72961952020-06-19 Simulations of the 2D self-assembly of tripod-shaped building blocks Baran, Łukasz Rżysko, Wojciech Słyk, Edyta Beilstein J Nanotechnol Full Research Paper We introduce a molecular dynamics (MD) coarse-grained model for the description of tripod building blocks. This model has been used by us already for linear, V-shape, and tetratopic molecules. We wanted to further extend its possibilities to trifunctional molecules to prove its versatility. For the chosen systems we have also compared the MD results with Monte Carlo results on a triangular lattice. We have shown that the constraints present in the latter method can enforce the formation of completely different structures, not reproducible with off-lattice simulations. In addition to that, we have characterized the obtained structures regarding various parameters such as theoretical diffraction pattern and average association number. Beilstein-Institut 2020-06-08 /pmc/articles/PMC7296195/ /pubmed/32566438 http://dx.doi.org/10.3762/bjnano.11.73 Text en Copyright © 2020, Baran et al. https://creativecommons.org/licenses/by/4.0https://www.beilstein-journals.org/bjnano/termsThis is an Open Access article under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0). Please note that the reuse, redistribution and reproduction in particular requires that the authors and source are credited. The license is subject to the Beilstein Journal of Nanotechnology terms and conditions: (https://www.beilstein-journals.org/bjnano/terms)
spellingShingle Full Research Paper
Baran, Łukasz
Rżysko, Wojciech
Słyk, Edyta
Simulations of the 2D self-assembly of tripod-shaped building blocks
title Simulations of the 2D self-assembly of tripod-shaped building blocks
title_full Simulations of the 2D self-assembly of tripod-shaped building blocks
title_fullStr Simulations of the 2D self-assembly of tripod-shaped building blocks
title_full_unstemmed Simulations of the 2D self-assembly of tripod-shaped building blocks
title_short Simulations of the 2D self-assembly of tripod-shaped building blocks
title_sort simulations of the 2d self-assembly of tripod-shaped building blocks
topic Full Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7296195/
https://www.ncbi.nlm.nih.gov/pubmed/32566438
http://dx.doi.org/10.3762/bjnano.11.73
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