Cargando…

Accounting for space and uncertainty in real‐time location system‐derived contact networks

1. Point data obtained from real‐time location systems (RTLSs) can be processed into animal contact networks, describing instances of interaction between tracked individuals. Proximity‐based definitions of interanimal “contact,” however, may be inadequate for describing epidemiologically and sociolo...

Descripción completa

Detalles Bibliográficos
Autores principales: Farthing, Trevor S., Dawson, Daniel E., Sanderson, Michael W., Lanzas, Cristina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7297745/
https://www.ncbi.nlm.nih.gov/pubmed/32551054
http://dx.doi.org/10.1002/ece3.6225
_version_ 1783547070711332864
author Farthing, Trevor S.
Dawson, Daniel E.
Sanderson, Michael W.
Lanzas, Cristina
author_facet Farthing, Trevor S.
Dawson, Daniel E.
Sanderson, Michael W.
Lanzas, Cristina
author_sort Farthing, Trevor S.
collection PubMed
description 1. Point data obtained from real‐time location systems (RTLSs) can be processed into animal contact networks, describing instances of interaction between tracked individuals. Proximity‐based definitions of interanimal “contact,” however, may be inadequate for describing epidemiologically and sociologically relevant interactions involving body parts or other physical spaces relatively far from tracking devices. This weakness can be overcome by using polygons, rather than points, to represent tracked individuals and defining “contact” as polygon intersections. 2. We present novel procedures for deriving polygons from RTLS point data while maintaining distances and orientations associated with individuals' relocation events. We demonstrate the versatility of this methodology for network modeling using two contact network creation examples, wherein we use this procedure to create (a) interanimal physical contact networks and (b) a visual contact network. Additionally, in creating our networks, we establish another procedure to adjust definitions of “contact” to account for RTLS positional accuracy, ensuring all true contacts are likely captured and represented in our networks. 3. Using the methods described herein and the associated R package we have developed, called contact, researchers can derive polygons from RTLS points. Furthermore, we show that these polygons are highly versatile for contact network creation and can be used to answer a wide variety of epidemiological, ethological, and sociological research questions. 4. By introducing these methodologies and providing the means to easily apply them through the contact R package, we hope to vastly improve network‐model realism and researchers' ability to draw inferences from RTLS data.
format Online
Article
Text
id pubmed-7297745
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-72977452020-06-17 Accounting for space and uncertainty in real‐time location system‐derived contact networks Farthing, Trevor S. Dawson, Daniel E. Sanderson, Michael W. Lanzas, Cristina Ecol Evol Original Research 1. Point data obtained from real‐time location systems (RTLSs) can be processed into animal contact networks, describing instances of interaction between tracked individuals. Proximity‐based definitions of interanimal “contact,” however, may be inadequate for describing epidemiologically and sociologically relevant interactions involving body parts or other physical spaces relatively far from tracking devices. This weakness can be overcome by using polygons, rather than points, to represent tracked individuals and defining “contact” as polygon intersections. 2. We present novel procedures for deriving polygons from RTLS point data while maintaining distances and orientations associated with individuals' relocation events. We demonstrate the versatility of this methodology for network modeling using two contact network creation examples, wherein we use this procedure to create (a) interanimal physical contact networks and (b) a visual contact network. Additionally, in creating our networks, we establish another procedure to adjust definitions of “contact” to account for RTLS positional accuracy, ensuring all true contacts are likely captured and represented in our networks. 3. Using the methods described herein and the associated R package we have developed, called contact, researchers can derive polygons from RTLS points. Furthermore, we show that these polygons are highly versatile for contact network creation and can be used to answer a wide variety of epidemiological, ethological, and sociological research questions. 4. By introducing these methodologies and providing the means to easily apply them through the contact R package, we hope to vastly improve network‐model realism and researchers' ability to draw inferences from RTLS data. John Wiley and Sons Inc. 2020-04-12 /pmc/articles/PMC7297745/ /pubmed/32551054 http://dx.doi.org/10.1002/ece3.6225 Text en © 2020 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Farthing, Trevor S.
Dawson, Daniel E.
Sanderson, Michael W.
Lanzas, Cristina
Accounting for space and uncertainty in real‐time location system‐derived contact networks
title Accounting for space and uncertainty in real‐time location system‐derived contact networks
title_full Accounting for space and uncertainty in real‐time location system‐derived contact networks
title_fullStr Accounting for space and uncertainty in real‐time location system‐derived contact networks
title_full_unstemmed Accounting for space and uncertainty in real‐time location system‐derived contact networks
title_short Accounting for space and uncertainty in real‐time location system‐derived contact networks
title_sort accounting for space and uncertainty in real‐time location system‐derived contact networks
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7297745/
https://www.ncbi.nlm.nih.gov/pubmed/32551054
http://dx.doi.org/10.1002/ece3.6225
work_keys_str_mv AT farthingtrevors accountingforspaceanduncertaintyinrealtimelocationsystemderivedcontactnetworks
AT dawsondaniele accountingforspaceanduncertaintyinrealtimelocationsystemderivedcontactnetworks
AT sandersonmichaelw accountingforspaceanduncertaintyinrealtimelocationsystemderivedcontactnetworks
AT lanzascristina accountingforspaceanduncertaintyinrealtimelocationsystemderivedcontactnetworks