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Preliminary Results on Pulmonary Tuberculosis Detection in Chest X-Ray Using Convolutional Neural Networks

Tuberculosis (TB), is an ancient disease that probably affects humans since pre-hominids. This disease is caused by bacteria belonging to the mycobacterium tuberculosis complex and usually affects the lungs in up to 67% of cases. In 2019, there were estimated to be over 10 million tuberculosis cases...

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Autores principales: Colombo Filho, Márcio Eloi, Mello Galliez, Rafael, Andrade Bernardi, Filipe, de Oliveira, Lariza Laura, Kritski, Afrânio, Koenigkam Santos, Marcel, Alves, Domingos
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7303695/
http://dx.doi.org/10.1007/978-3-030-50423-6_42
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author Colombo Filho, Márcio Eloi
Mello Galliez, Rafael
Andrade Bernardi, Filipe
de Oliveira, Lariza Laura
Kritski, Afrânio
Koenigkam Santos, Marcel
Alves, Domingos
author_facet Colombo Filho, Márcio Eloi
Mello Galliez, Rafael
Andrade Bernardi, Filipe
de Oliveira, Lariza Laura
Kritski, Afrânio
Koenigkam Santos, Marcel
Alves, Domingos
author_sort Colombo Filho, Márcio Eloi
collection PubMed
description Tuberculosis (TB), is an ancient disease that probably affects humans since pre-hominids. This disease is caused by bacteria belonging to the mycobacterium tuberculosis complex and usually affects the lungs in up to 67% of cases. In 2019, there were estimated to be over 10 million tuberculosis cases in the world, in the same year TB was between the ten leading causes of death, and the deadliest from a single infectious agent. Chest X-ray (CXR) has recently been promoted by the WHO as a tool possibly placed early in screening and triaging algorithms for TB detection. Numerous TB prevalence surveys have demonstrated that CXR is the most sensitive screening tool for pulmonary TB and that a significant proportion of people with TB are asymptomatic in the early stages of the disease. This study presents experimentation of classic convolutional neural network architectures on public CRX databases in order to create a tool applied to the diagnostic aid of TB in chest X-ray images. As result the study has an AUC ranging from 0.78 to 0.84, sensitivity from 0.76 to 0.86 and specificity from 0.58 to 0.74 depending on the network architecture. The observed performance by these metrics alone are within the range of metrics found in the literature, although there is much room for metrics improvement and bias avoiding. Also, the usage of the model in a triage use-case could be used to validate the efficiency of the model in the future.
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spelling pubmed-73036952020-06-19 Preliminary Results on Pulmonary Tuberculosis Detection in Chest X-Ray Using Convolutional Neural Networks Colombo Filho, Márcio Eloi Mello Galliez, Rafael Andrade Bernardi, Filipe de Oliveira, Lariza Laura Kritski, Afrânio Koenigkam Santos, Marcel Alves, Domingos Computational Science – ICCS 2020 Article Tuberculosis (TB), is an ancient disease that probably affects humans since pre-hominids. This disease is caused by bacteria belonging to the mycobacterium tuberculosis complex and usually affects the lungs in up to 67% of cases. In 2019, there were estimated to be over 10 million tuberculosis cases in the world, in the same year TB was between the ten leading causes of death, and the deadliest from a single infectious agent. Chest X-ray (CXR) has recently been promoted by the WHO as a tool possibly placed early in screening and triaging algorithms for TB detection. Numerous TB prevalence surveys have demonstrated that CXR is the most sensitive screening tool for pulmonary TB and that a significant proportion of people with TB are asymptomatic in the early stages of the disease. This study presents experimentation of classic convolutional neural network architectures on public CRX databases in order to create a tool applied to the diagnostic aid of TB in chest X-ray images. As result the study has an AUC ranging from 0.78 to 0.84, sensitivity from 0.76 to 0.86 and specificity from 0.58 to 0.74 depending on the network architecture. The observed performance by these metrics alone are within the range of metrics found in the literature, although there is much room for metrics improvement and bias avoiding. Also, the usage of the model in a triage use-case could be used to validate the efficiency of the model in the future. 2020-05-23 /pmc/articles/PMC7303695/ http://dx.doi.org/10.1007/978-3-030-50423-6_42 Text en © Springer Nature Switzerland AG 2020 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Article
Colombo Filho, Márcio Eloi
Mello Galliez, Rafael
Andrade Bernardi, Filipe
de Oliveira, Lariza Laura
Kritski, Afrânio
Koenigkam Santos, Marcel
Alves, Domingos
Preliminary Results on Pulmonary Tuberculosis Detection in Chest X-Ray Using Convolutional Neural Networks
title Preliminary Results on Pulmonary Tuberculosis Detection in Chest X-Ray Using Convolutional Neural Networks
title_full Preliminary Results on Pulmonary Tuberculosis Detection in Chest X-Ray Using Convolutional Neural Networks
title_fullStr Preliminary Results on Pulmonary Tuberculosis Detection in Chest X-Ray Using Convolutional Neural Networks
title_full_unstemmed Preliminary Results on Pulmonary Tuberculosis Detection in Chest X-Ray Using Convolutional Neural Networks
title_short Preliminary Results on Pulmonary Tuberculosis Detection in Chest X-Ray Using Convolutional Neural Networks
title_sort preliminary results on pulmonary tuberculosis detection in chest x-ray using convolutional neural networks
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7303695/
http://dx.doi.org/10.1007/978-3-030-50423-6_42
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