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Distributed Regression Analysis Application in Large Distributed Data Networks: Analysis of Precision and Operational Performance
BACKGROUND: A distributed data network approach combined with distributed regression analysis (DRA) can reduce the risk of disclosing sensitive individual and institutional information in multicenter studies. However, software that facilitates large-scale and efficient implementation of DRA is limit...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
JMIR Publications
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7303834/ https://www.ncbi.nlm.nih.gov/pubmed/32496200 http://dx.doi.org/10.2196/15073 |
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author | Her, Qoua Malenfant, Jessica Zhang, Zilu Vilk, Yury Young, Jessica Tabano, David Hamilton, Jack Johnson, Ron Raebel, Marsha Boudreau, Denise Toh, Sengwee |
author_facet | Her, Qoua Malenfant, Jessica Zhang, Zilu Vilk, Yury Young, Jessica Tabano, David Hamilton, Jack Johnson, Ron Raebel, Marsha Boudreau, Denise Toh, Sengwee |
author_sort | Her, Qoua |
collection | PubMed |
description | BACKGROUND: A distributed data network approach combined with distributed regression analysis (DRA) can reduce the risk of disclosing sensitive individual and institutional information in multicenter studies. However, software that facilitates large-scale and efficient implementation of DRA is limited. OBJECTIVE: This study aimed to assess the precision and operational performance of a DRA application comprising a SAS-based DRA package and a file transfer workflow developed within the open-source distributed networking software PopMedNet in a horizontally partitioned distributed data network. METHODS: We executed the SAS-based DRA package to perform distributed linear, logistic, and Cox proportional hazards regression analysis on a real-world test case with 3 data partners. We used PopMedNet to iteratively and automatically transfer highly summarized information between the data partners and the analysis center. We compared the DRA results with the results from standard SAS procedures executed on the pooled individual-level dataset to evaluate the precision of the SAS-based DRA package. We computed the execution time of each step in the workflow to evaluate the operational performance of the PopMedNet-driven file transfer workflow. RESULTS: All DRA results were precise (<10(−12)), and DRA model fit curves were identical or similar to those obtained from the corresponding pooled individual-level data analyses. All regression models required less than 20 min for full end-to-end execution. CONCLUSIONS: We integrated a SAS-based DRA package with PopMedNet and successfully tested the new capability within an active distributed data network. The study demonstrated the validity and feasibility of using DRA to enable more privacy-protecting analysis in multicenter studies. |
format | Online Article Text |
id | pubmed-7303834 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | JMIR Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-73038342020-06-24 Distributed Regression Analysis Application in Large Distributed Data Networks: Analysis of Precision and Operational Performance Her, Qoua Malenfant, Jessica Zhang, Zilu Vilk, Yury Young, Jessica Tabano, David Hamilton, Jack Johnson, Ron Raebel, Marsha Boudreau, Denise Toh, Sengwee JMIR Med Inform Original Paper BACKGROUND: A distributed data network approach combined with distributed regression analysis (DRA) can reduce the risk of disclosing sensitive individual and institutional information in multicenter studies. However, software that facilitates large-scale and efficient implementation of DRA is limited. OBJECTIVE: This study aimed to assess the precision and operational performance of a DRA application comprising a SAS-based DRA package and a file transfer workflow developed within the open-source distributed networking software PopMedNet in a horizontally partitioned distributed data network. METHODS: We executed the SAS-based DRA package to perform distributed linear, logistic, and Cox proportional hazards regression analysis on a real-world test case with 3 data partners. We used PopMedNet to iteratively and automatically transfer highly summarized information between the data partners and the analysis center. We compared the DRA results with the results from standard SAS procedures executed on the pooled individual-level dataset to evaluate the precision of the SAS-based DRA package. We computed the execution time of each step in the workflow to evaluate the operational performance of the PopMedNet-driven file transfer workflow. RESULTS: All DRA results were precise (<10(−12)), and DRA model fit curves were identical or similar to those obtained from the corresponding pooled individual-level data analyses. All regression models required less than 20 min for full end-to-end execution. CONCLUSIONS: We integrated a SAS-based DRA package with PopMedNet and successfully tested the new capability within an active distributed data network. The study demonstrated the validity and feasibility of using DRA to enable more privacy-protecting analysis in multicenter studies. JMIR Publications 2020-06-04 /pmc/articles/PMC7303834/ /pubmed/32496200 http://dx.doi.org/10.2196/15073 Text en ©Qoua Her, Jessica Malenfant, Zilu Zhang, Yury Vilk, Jessica Young, David Tabano, Jack Hamilton, Ron Johnson, Marsha Raebel, Denise Boudreau, Sengwee Toh. Originally published in JMIR Medical Informatics (http://medinform.jmir.org), 04.06.2020. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Medical Informatics, is properly cited. The complete bibliographic information, a link to the original publication on http://medinform.jmir.org/, as well as this copyright and license information must be included. |
spellingShingle | Original Paper Her, Qoua Malenfant, Jessica Zhang, Zilu Vilk, Yury Young, Jessica Tabano, David Hamilton, Jack Johnson, Ron Raebel, Marsha Boudreau, Denise Toh, Sengwee Distributed Regression Analysis Application in Large Distributed Data Networks: Analysis of Precision and Operational Performance |
title | Distributed Regression Analysis Application in Large Distributed Data Networks: Analysis of Precision and Operational Performance |
title_full | Distributed Regression Analysis Application in Large Distributed Data Networks: Analysis of Precision and Operational Performance |
title_fullStr | Distributed Regression Analysis Application in Large Distributed Data Networks: Analysis of Precision and Operational Performance |
title_full_unstemmed | Distributed Regression Analysis Application in Large Distributed Data Networks: Analysis of Precision and Operational Performance |
title_short | Distributed Regression Analysis Application in Large Distributed Data Networks: Analysis of Precision and Operational Performance |
title_sort | distributed regression analysis application in large distributed data networks: analysis of precision and operational performance |
topic | Original Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7303834/ https://www.ncbi.nlm.nih.gov/pubmed/32496200 http://dx.doi.org/10.2196/15073 |
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