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Nuclear Quantum Effects from the Analysis of Smoothed Trajectories: Pilot Study for Water
[Image: see text] Nuclear quantum effects have significant contributions to thermodynamic quantities and structural properties; furthermore, very expensive methods are necessary for their accurate computation. In most calculations, these effects, for instance, zero-point energies, are simply neglect...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American
Chemical Society
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7304866/ https://www.ncbi.nlm.nih.gov/pubmed/32268067 http://dx.doi.org/10.1021/acs.jctc.9b00703 |
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author | Berta, Dénes Ferenc, Dávid Bakó, Imre Madarász, Ádám |
author_facet | Berta, Dénes Ferenc, Dávid Bakó, Imre Madarász, Ádám |
author_sort | Berta, Dénes |
collection | PubMed |
description | [Image: see text] Nuclear quantum effects have significant contributions to thermodynamic quantities and structural properties; furthermore, very expensive methods are necessary for their accurate computation. In most calculations, these effects, for instance, zero-point energies, are simply neglected or only taken into account within the quantum harmonic oscillator approximation. Herein, we present a new method, Generalized Smoothed Trajectory Analysis, to determine nuclear quantum effects from molecular dynamics simulations. The broad applicability is demonstrated with the examples of a harmonic oscillator and different states of water. Ab initio molecular dynamics simulations have been performed for ideal gas up to the temperature of 5000 K. Classical molecular dynamics have been carried out for hexagonal ice, liquid water, and vapor at atmospheric pressure. With respect to the experimental heat capacity, our method outperforms previous calculations in the literature in a wide temperature range at lower computational cost than other alternatives. Dynamic and structural nuclear quantum effects of water are also discussed. |
format | Online Article Text |
id | pubmed-7304866 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | American
Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-73048662020-06-22 Nuclear Quantum Effects from the Analysis of Smoothed Trajectories: Pilot Study for Water Berta, Dénes Ferenc, Dávid Bakó, Imre Madarász, Ádám J Chem Theory Comput [Image: see text] Nuclear quantum effects have significant contributions to thermodynamic quantities and structural properties; furthermore, very expensive methods are necessary for their accurate computation. In most calculations, these effects, for instance, zero-point energies, are simply neglected or only taken into account within the quantum harmonic oscillator approximation. Herein, we present a new method, Generalized Smoothed Trajectory Analysis, to determine nuclear quantum effects from molecular dynamics simulations. The broad applicability is demonstrated with the examples of a harmonic oscillator and different states of water. Ab initio molecular dynamics simulations have been performed for ideal gas up to the temperature of 5000 K. Classical molecular dynamics have been carried out for hexagonal ice, liquid water, and vapor at atmospheric pressure. With respect to the experimental heat capacity, our method outperforms previous calculations in the literature in a wide temperature range at lower computational cost than other alternatives. Dynamic and structural nuclear quantum effects of water are also discussed. American Chemical Society 2020-04-08 2020-05-12 /pmc/articles/PMC7304866/ /pubmed/32268067 http://dx.doi.org/10.1021/acs.jctc.9b00703 Text en Copyright © 2020 American Chemical Society This is an open access article published under a Creative Commons Attribution (CC-BY) License (http://pubs.acs.org/page/policy/authorchoice_ccby_termsofuse.html) , which permits unrestricted use, distribution and reproduction in any medium, provided the author and source are cited. |
spellingShingle | Berta, Dénes Ferenc, Dávid Bakó, Imre Madarász, Ádám Nuclear Quantum Effects from the Analysis of Smoothed Trajectories: Pilot Study for Water |
title | Nuclear Quantum Effects from the Analysis of Smoothed
Trajectories: Pilot Study for Water |
title_full | Nuclear Quantum Effects from the Analysis of Smoothed
Trajectories: Pilot Study for Water |
title_fullStr | Nuclear Quantum Effects from the Analysis of Smoothed
Trajectories: Pilot Study for Water |
title_full_unstemmed | Nuclear Quantum Effects from the Analysis of Smoothed
Trajectories: Pilot Study for Water |
title_short | Nuclear Quantum Effects from the Analysis of Smoothed
Trajectories: Pilot Study for Water |
title_sort | nuclear quantum effects from the analysis of smoothed
trajectories: pilot study for water |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7304866/ https://www.ncbi.nlm.nih.gov/pubmed/32268067 http://dx.doi.org/10.1021/acs.jctc.9b00703 |
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