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Modeling the Alkaline Hydrolysis of Diaryl Sulfate Diesters: A Mechanistic Study
[Image: see text] Phosphate and sulfate esters have important roles in regulating cellular processes. However, while there has been substantial experimental and computational investigation of the mechanisms and the transition states involved in phosphate ester hydrolysis, there is far less work on s...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7304899/ https://www.ncbi.nlm.nih.gov/pubmed/32309943 http://dx.doi.org/10.1021/acs.joc.0c00441 |
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author | Szeler, Klaudia Williams, Nicholas H. Hengge, Alvan C. Kamerlin, Shina C. L. |
author_facet | Szeler, Klaudia Williams, Nicholas H. Hengge, Alvan C. Kamerlin, Shina C. L. |
author_sort | Szeler, Klaudia |
collection | PubMed |
description | [Image: see text] Phosphate and sulfate esters have important roles in regulating cellular processes. However, while there has been substantial experimental and computational investigation of the mechanisms and the transition states involved in phosphate ester hydrolysis, there is far less work on sulfate ester hydrolysis. Here, we report a detailed computational study of the alkaline hydrolysis of diaryl sulfate diesters, using different DFT functionals as well as mixed implicit/explicit solvation with varying numbers of explicit water molecules. We consider the impact of the computational model on computed linear free-energy relationships (LFER) and the nature of the transition states (TS) involved. We obtain good qualitative agreement with experimental LFER data when using a pure implicit solvent model and excellent agreement with experimental kinetic isotope effects for all models used. Our calculations suggest that sulfate diester hydrolysis proceeds through loose transition states, with minimal bond formation to the nucleophile and bond cleavage to the leaving group already initiated. Comparison to prior work indicates that these TS are similar in nature to those for the alkaline hydrolysis of neutral arylsulfonate monoesters or charged phosphate diesters and fluorophosphates. Obtaining more detailed insights into the transition states involved assists in understanding the selectivity of enzymes that hydrolyze these reactions. |
format | Online Article Text |
id | pubmed-7304899 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-73048992020-06-22 Modeling the Alkaline Hydrolysis of Diaryl Sulfate Diesters: A Mechanistic Study Szeler, Klaudia Williams, Nicholas H. Hengge, Alvan C. Kamerlin, Shina C. L. J Org Chem [Image: see text] Phosphate and sulfate esters have important roles in regulating cellular processes. However, while there has been substantial experimental and computational investigation of the mechanisms and the transition states involved in phosphate ester hydrolysis, there is far less work on sulfate ester hydrolysis. Here, we report a detailed computational study of the alkaline hydrolysis of diaryl sulfate diesters, using different DFT functionals as well as mixed implicit/explicit solvation with varying numbers of explicit water molecules. We consider the impact of the computational model on computed linear free-energy relationships (LFER) and the nature of the transition states (TS) involved. We obtain good qualitative agreement with experimental LFER data when using a pure implicit solvent model and excellent agreement with experimental kinetic isotope effects for all models used. Our calculations suggest that sulfate diester hydrolysis proceeds through loose transition states, with minimal bond formation to the nucleophile and bond cleavage to the leaving group already initiated. Comparison to prior work indicates that these TS are similar in nature to those for the alkaline hydrolysis of neutral arylsulfonate monoesters or charged phosphate diesters and fluorophosphates. Obtaining more detailed insights into the transition states involved assists in understanding the selectivity of enzymes that hydrolyze these reactions. American Chemical Society 2020-04-20 2020-05-15 /pmc/articles/PMC7304899/ /pubmed/32309943 http://dx.doi.org/10.1021/acs.joc.0c00441 Text en Copyright © 2020 American Chemical Society This is an open access article published under a Creative Commons Attribution (CC-BY) License (http://pubs.acs.org/page/policy/authorchoice_ccby_termsofuse.html) , which permits unrestricted use, distribution and reproduction in any medium, provided the author and source are cited. |
spellingShingle | Szeler, Klaudia Williams, Nicholas H. Hengge, Alvan C. Kamerlin, Shina C. L. Modeling the Alkaline Hydrolysis of Diaryl Sulfate Diesters: A Mechanistic Study |
title | Modeling the Alkaline
Hydrolysis of Diaryl Sulfate
Diesters: A Mechanistic Study |
title_full | Modeling the Alkaline
Hydrolysis of Diaryl Sulfate
Diesters: A Mechanistic Study |
title_fullStr | Modeling the Alkaline
Hydrolysis of Diaryl Sulfate
Diesters: A Mechanistic Study |
title_full_unstemmed | Modeling the Alkaline
Hydrolysis of Diaryl Sulfate
Diesters: A Mechanistic Study |
title_short | Modeling the Alkaline
Hydrolysis of Diaryl Sulfate
Diesters: A Mechanistic Study |
title_sort | modeling the alkaline
hydrolysis of diaryl sulfate
diesters: a mechanistic study |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7304899/ https://www.ncbi.nlm.nih.gov/pubmed/32309943 http://dx.doi.org/10.1021/acs.joc.0c00441 |
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