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Novel rapid identification of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) by real-time RT-PCR using BD Max Open System in Taiwan

Coronavirus disease 2019 has become a worldwide pandemic. By April 7, 2020, approximately 1,279,722 confirmed cases were reported worldwide including those in Asia, European Region, African Region and Region of the Americas. Rapid and accurate detection of Severe Acute Respiratory Syndrome Virus 2 (...

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Autores principales: Perng, Cherng-Lih, Jian, Ming-Jr, Chang, Chih-Kai, Lin, Jung-Chung, Yeh, Kuo-Ming, Chen, Chien-Wen, Chiu, Sheng-Kang, Chung, Hsing-Yi, Wang, Yi-Hui, Liao, Shu-Jung, Li, Shih-Yi, Hsieh, Shan-Shan, Tsai, Shih-Hung, Chang, Feng-Yee, Shang, Hung-Sheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7305773/
https://www.ncbi.nlm.nih.gov/pubmed/32596046
http://dx.doi.org/10.7717/peerj.9318
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author Perng, Cherng-Lih
Jian, Ming-Jr
Chang, Chih-Kai
Lin, Jung-Chung
Yeh, Kuo-Ming
Chen, Chien-Wen
Chiu, Sheng-Kang
Chung, Hsing-Yi
Wang, Yi-Hui
Liao, Shu-Jung
Li, Shih-Yi
Hsieh, Shan-Shan
Tsai, Shih-Hung
Chang, Feng-Yee
Shang, Hung-Sheng
author_facet Perng, Cherng-Lih
Jian, Ming-Jr
Chang, Chih-Kai
Lin, Jung-Chung
Yeh, Kuo-Ming
Chen, Chien-Wen
Chiu, Sheng-Kang
Chung, Hsing-Yi
Wang, Yi-Hui
Liao, Shu-Jung
Li, Shih-Yi
Hsieh, Shan-Shan
Tsai, Shih-Hung
Chang, Feng-Yee
Shang, Hung-Sheng
author_sort Perng, Cherng-Lih
collection PubMed
description Coronavirus disease 2019 has become a worldwide pandemic. By April 7, 2020, approximately 1,279,722 confirmed cases were reported worldwide including those in Asia, European Region, African Region and Region of the Americas. Rapid and accurate detection of Severe Acute Respiratory Syndrome Virus 2 (SARS-CoV-2) is critical for patient care and implementing public health measures to control the spread of infection. In this study, we developed and validated a rapid total nucleic acid extraction method based on real‐time RT-PCR for reliable, high‐throughput identification of SARS-CoV-2 using the BD MAX platform. For clinical validation, 300 throat swab and 100 sputum clinical samples were examined by both the BD MAX platform and in-house real-time RT-PCR methods, which showed 100% concordant results. This BD MAX protocol is fully automated and the turnaround time from sample to results is approximately 2.5 h for 24 samples compared to 4.8 h by in-house real-time RT-PCR. Our developed BD MAX RT-PCR assay can accurately identify SARS-CoV-2 infection and shorten the turnaround time to increase the effectiveness of control and prevention measures for this emerging infectious disease.
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spelling pubmed-73057732020-06-25 Novel rapid identification of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) by real-time RT-PCR using BD Max Open System in Taiwan Perng, Cherng-Lih Jian, Ming-Jr Chang, Chih-Kai Lin, Jung-Chung Yeh, Kuo-Ming Chen, Chien-Wen Chiu, Sheng-Kang Chung, Hsing-Yi Wang, Yi-Hui Liao, Shu-Jung Li, Shih-Yi Hsieh, Shan-Shan Tsai, Shih-Hung Chang, Feng-Yee Shang, Hung-Sheng PeerJ Microbiology Coronavirus disease 2019 has become a worldwide pandemic. By April 7, 2020, approximately 1,279,722 confirmed cases were reported worldwide including those in Asia, European Region, African Region and Region of the Americas. Rapid and accurate detection of Severe Acute Respiratory Syndrome Virus 2 (SARS-CoV-2) is critical for patient care and implementing public health measures to control the spread of infection. In this study, we developed and validated a rapid total nucleic acid extraction method based on real‐time RT-PCR for reliable, high‐throughput identification of SARS-CoV-2 using the BD MAX platform. For clinical validation, 300 throat swab and 100 sputum clinical samples were examined by both the BD MAX platform and in-house real-time RT-PCR methods, which showed 100% concordant results. This BD MAX protocol is fully automated and the turnaround time from sample to results is approximately 2.5 h for 24 samples compared to 4.8 h by in-house real-time RT-PCR. Our developed BD MAX RT-PCR assay can accurately identify SARS-CoV-2 infection and shorten the turnaround time to increase the effectiveness of control and prevention measures for this emerging infectious disease. PeerJ Inc. 2020-06-17 /pmc/articles/PMC7305773/ /pubmed/32596046 http://dx.doi.org/10.7717/peerj.9318 Text en © 2020 Perng et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Microbiology
Perng, Cherng-Lih
Jian, Ming-Jr
Chang, Chih-Kai
Lin, Jung-Chung
Yeh, Kuo-Ming
Chen, Chien-Wen
Chiu, Sheng-Kang
Chung, Hsing-Yi
Wang, Yi-Hui
Liao, Shu-Jung
Li, Shih-Yi
Hsieh, Shan-Shan
Tsai, Shih-Hung
Chang, Feng-Yee
Shang, Hung-Sheng
Novel rapid identification of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) by real-time RT-PCR using BD Max Open System in Taiwan
title Novel rapid identification of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) by real-time RT-PCR using BD Max Open System in Taiwan
title_full Novel rapid identification of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) by real-time RT-PCR using BD Max Open System in Taiwan
title_fullStr Novel rapid identification of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) by real-time RT-PCR using BD Max Open System in Taiwan
title_full_unstemmed Novel rapid identification of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) by real-time RT-PCR using BD Max Open System in Taiwan
title_short Novel rapid identification of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) by real-time RT-PCR using BD Max Open System in Taiwan
title_sort novel rapid identification of severe acute respiratory syndrome coronavirus 2 (sars-cov-2) by real-time rt-pcr using bd max open system in taiwan
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7305773/
https://www.ncbi.nlm.nih.gov/pubmed/32596046
http://dx.doi.org/10.7717/peerj.9318
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