Cargando…

Bacterial Group II Intron Genomic Neighborhoods Reflect Survival Strategies: Hiding and Hijacking

Group II (gII) introns are mobile retroelements that can spread to new DNA sites through retrotransposition, which can be influenced by a variety of host factors. To determine if these host factors bear any relationship to the genomic location of gII introns, we developed a bioinformatic pipeline wh...

Descripción completa

Detalles Bibliográficos
Autores principales:	Waldern, Justin, Schiraldi, Nicholas J, Belfort, Marlene, Novikova, Olga
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2020
Materias:	Discoveries
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7306698/ https://www.ncbi.nlm.nih.gov/pubmed/32134458 http://dx.doi.org/10.1093/molbev/msaa055

Ejemplares similares

Methylation of rRNA as a host defense against rampant group II intron retrotransposition
por: Waldern, Justin M., et al.
Publicado: (2021)

Intein Clustering Suggests Functional Importance in Different Domains of Life
por: Novikova, Olga, et al.
Publicado: (2016)

Group II intron as cold sensor for self-preservation and bacterial conjugation
por: Dong, Xiaolong, et al.
Publicado: (2020)

Group II Introns Generate Functional Chimeric Relaxase Enzymes with Modified Specificities through Exon Shuffling at Both the RNA and DNA Level
por: LaRoche-Johnston, Félix, et al.
Publicado: (2020)

Analysis of Fungal Genomes Reveals Commonalities of Intron Gain or Loss and Functions in Intron-Poor Species
por: Lim, Chun Shen, et al.
Publicado: (2021)

Intron Length Coevolution across Mammalian Genomes
por: Keane, Peter A., et al.
Publicado: (2016)

Integrating Phylogenetics With Intron Positions Illuminates the Origin of the Complex Spliceosome
por: Vosseberg, Julian, et al.
Publicado: (2023)

Distribution of Conventional and Nonconventional Introns in Tubulin (α and β) Genes of Euglenids
por: Milanowski, Rafał, et al.
Publicado: (2014)

Convergent Evolution of Ribonuclease H in LTR Retrotransposons and Retroviruses
por: Ustyantsev, Kirill, et al.
Publicado: (2015)

Colocality to Cofunctionality: Eukaryotic Gene Neighborhoods as a Resource for Function Discovery
por: Foflonker, Fatima, et al.
Publicado: (2020)

Folding Stability of Pax9 Intronic G-Quadruplex Correlates with Relative Molar Size in Eutherians
por: Jara-Espejo, Manuel, et al.
Publicado: (2020)

Group II intron–ribosome association protects intron RNA from degradation
por: Contreras, Lydia M., et al.
Publicado: (2013)

Imprecise intron losses are less frequent than precise intron losses but are not rare in plants
por: Ma, Ming-Yue, et al.
Publicado: (2015)

Structural accommodations accompanying splicing of a group II intron RNP
por: Dong, Xiaolong, et al.
Publicado: (2018)

The Neighborhood of the Spike Gene Is a Hotspot for Modular Intertypic Homologous and Nonhomologous Recombination in Coronavirus Genomes
por: Nikolaidis, Marios, et al.
Publicado: (2021)

New Insights into the Evolution and Gene Structure of the Mitochondrial Carrier Family Unveiled by Analyzing the Frequent and Conserved Intron Positions
por: Monné, Magnus, et al.
Publicado: (2023)

Survival and Evolution of a Large Multidrug Resistance Plasmid in New Clinical Bacterial Hosts
por: Porse, Andreas, et al.
Publicado: (2016)

Localization, mobility and fidelity of retrotransposed Group II introns in rRNA genes
por: Conlan, Lori H., et al.
Publicado: (2005)

Group II intron inhibits conjugative relaxase expression in bacteria by mRNA targeting
por: Qu, Guosheng, et al.
Publicado: (2018)

U12 intron positions are more strongly conserved between animals and plants than U2 intron positions
por: Basu, Malay Kumar, et al.
Publicado: (2008)

Small RNAs Reflect Grandparental Environments in Apomictic Dandelion
por: Morgado, Lionel, et al.
Publicado: (2017)

Why Selection Might Be Stronger When Populations Are Small: Intron Size and Density Predict within and between-Species Usage of Exonic Splice Associated cis-Motifs
por: Wu, XianMing, et al.
Publicado: (2015)

A decades-long journey with mobile introns
por: Belfort, Marlene
Publicado: (2015)

Interspecific Plastome Recombination Reflects Ancient Reticulate Evolution in Picea (Pinaceae)
por: Sullivan, Alexis R., et al.
Publicado: (2017)

Extensive Ethnolinguistic Diversity in Vietnam Reflects Multiple Sources of Genetic Diversity
por: Liu, Dang, et al.
Publicado: (2020)

Population Genomics of Wall Lizards Reflects the Dynamic History of the Mediterranean Basin
por: Yang, Weizhao, et al.
Publicado: (2021)

Structure of a Group II Intron Complexed with its Reverse Transcriptase
por: Qu, Guosheng, et al.
Publicado: (2016)

Genome Sequencing Reveals the Origin of the Allotetraploid Arabidopsis suecica
por: Novikova, Polina Yu., et al.
Publicado: (2017)

Database for bacterial group II introns
por: Candales, Manuel A., et al.
Publicado: (2012)

Expression Divergence between Escherichia coli and Salmonella enterica serovar Typhimurium Reflects Their Lifestyles
por: Meysman, Pieter, et al.
Publicado: (2013)

Evolutionary History of Endogenous Human Herpesvirus 6 Reflects Human Migration out of Africa
por: Aswad, Amr, et al.
Publicado: (2020)

The Genomes of the Livebearing Fish Species Poeciliopsis retropinna and Poeciliopsis turrubarensis Reflect Their Different Reproductive Strategies
por: van Kruistum, Henri, et al.
Publicado: (2020)

Fine-Scale Genetic Structure in the United Arab Emirates Reflects Endogamous and Consanguineous Culture, Population History, and Geography
por: Elliott, Katherine S, et al.
Publicado: (2022)

Transformation Asymmetry and the Evolution of the Bacterial Accessory Genome
por: Apagyi, Katinka J, et al.
Publicado: (2018)

Genetic Architecture and Fitness of Bacterial Interspecies Hybrids
por: Bartke, Katrin, et al.
Publicado: (2020)

The group II intron ribonucleoprotein precursor is a large, loosely packed structure
por: Huang, Tao, et al.
Publicado: (2011)

Exon and protein positioning in a pre-catalytic group II intron RNP primed for splicing
por: Liu, Nan, et al.
Publicado: (2020)

Efficient Inference of Recent and Ancestral Recombination within Bacterial Populations
por: Mostowy, Rafal, et al.
Publicado: (2017)

Bacterial Evolutionary Precursors of Eukaryotic Copper–Zinc Superoxide Dismutases
por: Wright, Gareth S A
Publicado: (2021)

Gene Survival and Death on the Human Y Chromosome
por: Wilson Sayres, Melissa A., et al.
Publicado: (2013)

Cannot write session to /tmp/vufind_sessions/sess_cnrmihgtj9pdr7vtp08gjobmv5