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ALKBH5 gene polymorphisms and Wilms tumor risk in Chinese children: A five‐center case‐control study

BACKGROUND: Wilms tumor is a frequently diagnosed renal cancer among children with unclear genetic causes. N6‐methyladenosine (m(6)A) modification genes play critical roles in tumorigenesis. However, whether genetic variations of m(6)A modification genes predispose to Wilms tumor remain unclear. ALK...

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Autores principales: Hua, Rui‐Xi, Liu, Jiabin, Fu, Wen, Zhu, Jinhong, Zhang, Jiao, Cheng, Jiwen, Li, Suhong, Zhou, Haixia, Xia, Huimin, He, Jing, Zhuo, Zhenjian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7307367/
https://www.ncbi.nlm.nih.gov/pubmed/32091154
http://dx.doi.org/10.1002/jcla.23251
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author Hua, Rui‐Xi
Liu, Jiabin
Fu, Wen
Zhu, Jinhong
Zhang, Jiao
Cheng, Jiwen
Li, Suhong
Zhou, Haixia
Xia, Huimin
He, Jing
Zhuo, Zhenjian
author_facet Hua, Rui‐Xi
Liu, Jiabin
Fu, Wen
Zhu, Jinhong
Zhang, Jiao
Cheng, Jiwen
Li, Suhong
Zhou, Haixia
Xia, Huimin
He, Jing
Zhuo, Zhenjian
author_sort Hua, Rui‐Xi
collection PubMed
description BACKGROUND: Wilms tumor is a frequently diagnosed renal cancer among children with unclear genetic causes. N6‐methyladenosine (m(6)A) modification genes play critical roles in tumorigenesis. However, whether genetic variations of m(6)A modification genes predispose to Wilms tumor remain unclear. ALKBH5 (AlkB homolog 5), a crucial member of m(6)A modification genes, encodes a demethylase that functions to reverse m(6)A RNA methylation. METHODS: Herein, we evaluated the association of single nucleotide polymorphisms (SNPs) in the m(6)A modification gene ALKBH5 and Wilms tumor susceptibility in a large multi‐center case‐control study. A total of 414 Wilms tumor cases and 1199 healthy controls were genotyped for ALKBH5 rs1378602 and rs8400 polymorphisms by TaqMan. RESULTS: No significant association was detected between these two polymorphisms and Wilms tumor risk. Moreover, 1, 2, and 1‐2 protective genotypes (rs1378602 AG/AA or rs8400 GG) did not significantly reduce Wilms tumor risk, compared with risk genotypes only. Stratification analysis revealed a significant relationship between rs1378602 AG/AA genotypes and decreased Wilms tumor risk in children in clinical stage I diseases [adjusted odds ratio (OR) = 0.56, 95% confidence interval (CI) = 0.32‐0.98, P = .042]. The presence of 1‐2 protective genotypes was correlated with decreased Wilms tumor risk in subgroups of age > 18 months, when compared to the absence of protective genotypes (adjusted OR = 0.74, 95% CI = 0.56‐0.98, P = .035). CONCLUSION: Collectively, our results demonstrate that ALKBH5 SNPs may exert a weak influence on susceptibility to Wilms tumor. This finding increases the understanding of the role of the m(6)A gene in tumorigenesis of Wilms tumor.
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spelling pubmed-73073672020-06-23 ALKBH5 gene polymorphisms and Wilms tumor risk in Chinese children: A five‐center case‐control study Hua, Rui‐Xi Liu, Jiabin Fu, Wen Zhu, Jinhong Zhang, Jiao Cheng, Jiwen Li, Suhong Zhou, Haixia Xia, Huimin He, Jing Zhuo, Zhenjian J Clin Lab Anal Research Articles BACKGROUND: Wilms tumor is a frequently diagnosed renal cancer among children with unclear genetic causes. N6‐methyladenosine (m(6)A) modification genes play critical roles in tumorigenesis. However, whether genetic variations of m(6)A modification genes predispose to Wilms tumor remain unclear. ALKBH5 (AlkB homolog 5), a crucial member of m(6)A modification genes, encodes a demethylase that functions to reverse m(6)A RNA methylation. METHODS: Herein, we evaluated the association of single nucleotide polymorphisms (SNPs) in the m(6)A modification gene ALKBH5 and Wilms tumor susceptibility in a large multi‐center case‐control study. A total of 414 Wilms tumor cases and 1199 healthy controls were genotyped for ALKBH5 rs1378602 and rs8400 polymorphisms by TaqMan. RESULTS: No significant association was detected between these two polymorphisms and Wilms tumor risk. Moreover, 1, 2, and 1‐2 protective genotypes (rs1378602 AG/AA or rs8400 GG) did not significantly reduce Wilms tumor risk, compared with risk genotypes only. Stratification analysis revealed a significant relationship between rs1378602 AG/AA genotypes and decreased Wilms tumor risk in children in clinical stage I diseases [adjusted odds ratio (OR) = 0.56, 95% confidence interval (CI) = 0.32‐0.98, P = .042]. The presence of 1‐2 protective genotypes was correlated with decreased Wilms tumor risk in subgroups of age > 18 months, when compared to the absence of protective genotypes (adjusted OR = 0.74, 95% CI = 0.56‐0.98, P = .035). CONCLUSION: Collectively, our results demonstrate that ALKBH5 SNPs may exert a weak influence on susceptibility to Wilms tumor. This finding increases the understanding of the role of the m(6)A gene in tumorigenesis of Wilms tumor. John Wiley and Sons Inc. 2020-02-24 /pmc/articles/PMC7307367/ /pubmed/32091154 http://dx.doi.org/10.1002/jcla.23251 Text en © 2020 The Authors. Journal of Clinical Laboratory Analysis Published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Hua, Rui‐Xi
Liu, Jiabin
Fu, Wen
Zhu, Jinhong
Zhang, Jiao
Cheng, Jiwen
Li, Suhong
Zhou, Haixia
Xia, Huimin
He, Jing
Zhuo, Zhenjian
ALKBH5 gene polymorphisms and Wilms tumor risk in Chinese children: A five‐center case‐control study
title ALKBH5 gene polymorphisms and Wilms tumor risk in Chinese children: A five‐center case‐control study
title_full ALKBH5 gene polymorphisms and Wilms tumor risk in Chinese children: A five‐center case‐control study
title_fullStr ALKBH5 gene polymorphisms and Wilms tumor risk in Chinese children: A five‐center case‐control study
title_full_unstemmed ALKBH5 gene polymorphisms and Wilms tumor risk in Chinese children: A five‐center case‐control study
title_short ALKBH5 gene polymorphisms and Wilms tumor risk in Chinese children: A five‐center case‐control study
title_sort alkbh5 gene polymorphisms and wilms tumor risk in chinese children: a five‐center case‐control study
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7307367/
https://www.ncbi.nlm.nih.gov/pubmed/32091154
http://dx.doi.org/10.1002/jcla.23251
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