Cargando…

A miRNA screen procedure identifies garz as an essential factor in adult glia functions and validates Drosophila as a beneficial 3Rs model to study glial functions and GBF1 biology

Invertebrate glia performs most of the key functions controlled by mammalian glia in the nervous system and provides an ideal model for genetic studies of glial functions. To study the influence of adult glial cells in ageing we have performed a genetic screen in Drosophila using a collection of tra...

Descripción completa

Detalles Bibliográficos
Autores principales: Gonçalves-Pimentel, Catarina, Mazaud, David, Kottler, Benjamin, Proelss, Sandra, Hirth, Frank, Fanto, Manolis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000 Research Limited 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7309417/
https://www.ncbi.nlm.nih.gov/pubmed/32595956
http://dx.doi.org/10.12688/f1000research.23154.2
_version_ 1783549201918984192
author Gonçalves-Pimentel, Catarina
Mazaud, David
Kottler, Benjamin
Proelss, Sandra
Hirth, Frank
Fanto, Manolis
author_facet Gonçalves-Pimentel, Catarina
Mazaud, David
Kottler, Benjamin
Proelss, Sandra
Hirth, Frank
Fanto, Manolis
author_sort Gonçalves-Pimentel, Catarina
collection PubMed
description Invertebrate glia performs most of the key functions controlled by mammalian glia in the nervous system and provides an ideal model for genetic studies of glial functions. To study the influence of adult glial cells in ageing we have performed a genetic screen in Drosophila using a collection of transgenic lines providing conditional expression of micro-RNAs (miRNAs). Here, we describe a methodological algorithm to identify and rank genes that are candidate to be targeted by miRNAs that shorten lifespan when expressed in adult glia. We have used four different databases for miRNA target prediction in Drosophila but find little agreement between them, overall. However, top candidate gene analysis shows potential to identify essential genes involved in adult glial functions. One example from our top candidates’ analysis is gartenzwerg ( garz). We establish that garz is necessary in many glial cell types, that it affects motor behaviour and, at the sub-cellular level, is responsible for defects in cellular membranes, autophagy and mitochondria quality control. We also verify the remarkable conservation of functions between garz and its mammalian orthologue, GBF1, validating the use of Drosophila as an alternative 3Rs-beneficial model to knock-out mice for studying the biology of GBF1, potentially involved in human neurodegenerative diseases.
format Online
Article
Text
id pubmed-7309417
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher F1000 Research Limited
record_format MEDLINE/PubMed
spelling pubmed-73094172020-06-25 A miRNA screen procedure identifies garz as an essential factor in adult glia functions and validates Drosophila as a beneficial 3Rs model to study glial functions and GBF1 biology Gonçalves-Pimentel, Catarina Mazaud, David Kottler, Benjamin Proelss, Sandra Hirth, Frank Fanto, Manolis F1000Res Method Article Invertebrate glia performs most of the key functions controlled by mammalian glia in the nervous system and provides an ideal model for genetic studies of glial functions. To study the influence of adult glial cells in ageing we have performed a genetic screen in Drosophila using a collection of transgenic lines providing conditional expression of micro-RNAs (miRNAs). Here, we describe a methodological algorithm to identify and rank genes that are candidate to be targeted by miRNAs that shorten lifespan when expressed in adult glia. We have used four different databases for miRNA target prediction in Drosophila but find little agreement between them, overall. However, top candidate gene analysis shows potential to identify essential genes involved in adult glial functions. One example from our top candidates’ analysis is gartenzwerg ( garz). We establish that garz is necessary in many glial cell types, that it affects motor behaviour and, at the sub-cellular level, is responsible for defects in cellular membranes, autophagy and mitochondria quality control. We also verify the remarkable conservation of functions between garz and its mammalian orthologue, GBF1, validating the use of Drosophila as an alternative 3Rs-beneficial model to knock-out mice for studying the biology of GBF1, potentially involved in human neurodegenerative diseases. F1000 Research Limited 2020-07-23 /pmc/articles/PMC7309417/ /pubmed/32595956 http://dx.doi.org/10.12688/f1000research.23154.2 Text en Copyright: © 2020 Gonçalves-Pimentel C et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Method Article
Gonçalves-Pimentel, Catarina
Mazaud, David
Kottler, Benjamin
Proelss, Sandra
Hirth, Frank
Fanto, Manolis
A miRNA screen procedure identifies garz as an essential factor in adult glia functions and validates Drosophila as a beneficial 3Rs model to study glial functions and GBF1 biology
title A miRNA screen procedure identifies garz as an essential factor in adult glia functions and validates Drosophila as a beneficial 3Rs model to study glial functions and GBF1 biology
title_full A miRNA screen procedure identifies garz as an essential factor in adult glia functions and validates Drosophila as a beneficial 3Rs model to study glial functions and GBF1 biology
title_fullStr A miRNA screen procedure identifies garz as an essential factor in adult glia functions and validates Drosophila as a beneficial 3Rs model to study glial functions and GBF1 biology
title_full_unstemmed A miRNA screen procedure identifies garz as an essential factor in adult glia functions and validates Drosophila as a beneficial 3Rs model to study glial functions and GBF1 biology
title_short A miRNA screen procedure identifies garz as an essential factor in adult glia functions and validates Drosophila as a beneficial 3Rs model to study glial functions and GBF1 biology
title_sort mirna screen procedure identifies garz as an essential factor in adult glia functions and validates drosophila as a beneficial 3rs model to study glial functions and gbf1 biology
topic Method Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7309417/
https://www.ncbi.nlm.nih.gov/pubmed/32595956
http://dx.doi.org/10.12688/f1000research.23154.2
work_keys_str_mv AT goncalvespimentelcatarina amirnascreenprocedureidentifiesgarzasanessentialfactorinadultgliafunctionsandvalidatesdrosophilaasabeneficial3rsmodeltostudyglialfunctionsandgbf1biology
AT mazauddavid amirnascreenprocedureidentifiesgarzasanessentialfactorinadultgliafunctionsandvalidatesdrosophilaasabeneficial3rsmodeltostudyglialfunctionsandgbf1biology
AT kottlerbenjamin amirnascreenprocedureidentifiesgarzasanessentialfactorinadultgliafunctionsandvalidatesdrosophilaasabeneficial3rsmodeltostudyglialfunctionsandgbf1biology
AT proelsssandra amirnascreenprocedureidentifiesgarzasanessentialfactorinadultgliafunctionsandvalidatesdrosophilaasabeneficial3rsmodeltostudyglialfunctionsandgbf1biology
AT hirthfrank amirnascreenprocedureidentifiesgarzasanessentialfactorinadultgliafunctionsandvalidatesdrosophilaasabeneficial3rsmodeltostudyglialfunctionsandgbf1biology
AT fantomanolis amirnascreenprocedureidentifiesgarzasanessentialfactorinadultgliafunctionsandvalidatesdrosophilaasabeneficial3rsmodeltostudyglialfunctionsandgbf1biology
AT goncalvespimentelcatarina mirnascreenprocedureidentifiesgarzasanessentialfactorinadultgliafunctionsandvalidatesdrosophilaasabeneficial3rsmodeltostudyglialfunctionsandgbf1biology
AT mazauddavid mirnascreenprocedureidentifiesgarzasanessentialfactorinadultgliafunctionsandvalidatesdrosophilaasabeneficial3rsmodeltostudyglialfunctionsandgbf1biology
AT kottlerbenjamin mirnascreenprocedureidentifiesgarzasanessentialfactorinadultgliafunctionsandvalidatesdrosophilaasabeneficial3rsmodeltostudyglialfunctionsandgbf1biology
AT proelsssandra mirnascreenprocedureidentifiesgarzasanessentialfactorinadultgliafunctionsandvalidatesdrosophilaasabeneficial3rsmodeltostudyglialfunctionsandgbf1biology
AT hirthfrank mirnascreenprocedureidentifiesgarzasanessentialfactorinadultgliafunctionsandvalidatesdrosophilaasabeneficial3rsmodeltostudyglialfunctionsandgbf1biology
AT fantomanolis mirnascreenprocedureidentifiesgarzasanessentialfactorinadultgliafunctionsandvalidatesdrosophilaasabeneficial3rsmodeltostudyglialfunctionsandgbf1biology