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A miRNA screen procedure identifies garz as an essential factor in adult glia functions and validates Drosophila as a beneficial 3Rs model to study glial functions and GBF1 biology
Invertebrate glia performs most of the key functions controlled by mammalian glia in the nervous system and provides an ideal model for genetic studies of glial functions. To study the influence of adult glial cells in ageing we have performed a genetic screen in Drosophila using a collection of tra...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
F1000 Research Limited
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7309417/ https://www.ncbi.nlm.nih.gov/pubmed/32595956 http://dx.doi.org/10.12688/f1000research.23154.2 |
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author | Gonçalves-Pimentel, Catarina Mazaud, David Kottler, Benjamin Proelss, Sandra Hirth, Frank Fanto, Manolis |
author_facet | Gonçalves-Pimentel, Catarina Mazaud, David Kottler, Benjamin Proelss, Sandra Hirth, Frank Fanto, Manolis |
author_sort | Gonçalves-Pimentel, Catarina |
collection | PubMed |
description | Invertebrate glia performs most of the key functions controlled by mammalian glia in the nervous system and provides an ideal model for genetic studies of glial functions. To study the influence of adult glial cells in ageing we have performed a genetic screen in Drosophila using a collection of transgenic lines providing conditional expression of micro-RNAs (miRNAs). Here, we describe a methodological algorithm to identify and rank genes that are candidate to be targeted by miRNAs that shorten lifespan when expressed in adult glia. We have used four different databases for miRNA target prediction in Drosophila but find little agreement between them, overall. However, top candidate gene analysis shows potential to identify essential genes involved in adult glial functions. One example from our top candidates’ analysis is gartenzwerg ( garz). We establish that garz is necessary in many glial cell types, that it affects motor behaviour and, at the sub-cellular level, is responsible for defects in cellular membranes, autophagy and mitochondria quality control. We also verify the remarkable conservation of functions between garz and its mammalian orthologue, GBF1, validating the use of Drosophila as an alternative 3Rs-beneficial model to knock-out mice for studying the biology of GBF1, potentially involved in human neurodegenerative diseases. |
format | Online Article Text |
id | pubmed-7309417 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | F1000 Research Limited |
record_format | MEDLINE/PubMed |
spelling | pubmed-73094172020-06-25 A miRNA screen procedure identifies garz as an essential factor in adult glia functions and validates Drosophila as a beneficial 3Rs model to study glial functions and GBF1 biology Gonçalves-Pimentel, Catarina Mazaud, David Kottler, Benjamin Proelss, Sandra Hirth, Frank Fanto, Manolis F1000Res Method Article Invertebrate glia performs most of the key functions controlled by mammalian glia in the nervous system and provides an ideal model for genetic studies of glial functions. To study the influence of adult glial cells in ageing we have performed a genetic screen in Drosophila using a collection of transgenic lines providing conditional expression of micro-RNAs (miRNAs). Here, we describe a methodological algorithm to identify and rank genes that are candidate to be targeted by miRNAs that shorten lifespan when expressed in adult glia. We have used four different databases for miRNA target prediction in Drosophila but find little agreement between them, overall. However, top candidate gene analysis shows potential to identify essential genes involved in adult glial functions. One example from our top candidates’ analysis is gartenzwerg ( garz). We establish that garz is necessary in many glial cell types, that it affects motor behaviour and, at the sub-cellular level, is responsible for defects in cellular membranes, autophagy and mitochondria quality control. We also verify the remarkable conservation of functions between garz and its mammalian orthologue, GBF1, validating the use of Drosophila as an alternative 3Rs-beneficial model to knock-out mice for studying the biology of GBF1, potentially involved in human neurodegenerative diseases. F1000 Research Limited 2020-07-23 /pmc/articles/PMC7309417/ /pubmed/32595956 http://dx.doi.org/10.12688/f1000research.23154.2 Text en Copyright: © 2020 Gonçalves-Pimentel C et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Method Article Gonçalves-Pimentel, Catarina Mazaud, David Kottler, Benjamin Proelss, Sandra Hirth, Frank Fanto, Manolis A miRNA screen procedure identifies garz as an essential factor in adult glia functions and validates Drosophila as a beneficial 3Rs model to study glial functions and GBF1 biology |
title | A miRNA screen procedure identifies
garz as an essential factor in adult glia functions and validates
Drosophila as a beneficial 3Rs model to study glial functions and GBF1 biology |
title_full | A miRNA screen procedure identifies
garz as an essential factor in adult glia functions and validates
Drosophila as a beneficial 3Rs model to study glial functions and GBF1 biology |
title_fullStr | A miRNA screen procedure identifies
garz as an essential factor in adult glia functions and validates
Drosophila as a beneficial 3Rs model to study glial functions and GBF1 biology |
title_full_unstemmed | A miRNA screen procedure identifies
garz as an essential factor in adult glia functions and validates
Drosophila as a beneficial 3Rs model to study glial functions and GBF1 biology |
title_short | A miRNA screen procedure identifies
garz as an essential factor in adult glia functions and validates
Drosophila as a beneficial 3Rs model to study glial functions and GBF1 biology |
title_sort | mirna screen procedure identifies
garz as an essential factor in adult glia functions and validates
drosophila as a beneficial 3rs model to study glial functions and gbf1 biology |
topic | Method Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7309417/ https://www.ncbi.nlm.nih.gov/pubmed/32595956 http://dx.doi.org/10.12688/f1000research.23154.2 |
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