Cargando…

The African wildlife ontology tutorial ontologies

BACKGROUND: Most tutorial ontologies focus on illustrating one aspect of ontology development, notably language features and automated reasoners, but ignore ontology development factors, such as emergent modelling guidelines and ontological principles. Yet, novices replicate examples from the exerci...

Descripción completa

Detalles Bibliográficos
Autor principal: Keet, C. Maria
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7310311/
https://www.ncbi.nlm.nih.gov/pubmed/32576239
http://dx.doi.org/10.1186/s13326-020-00224-y
_version_ 1783549347005202432
author Keet, C. Maria
author_facet Keet, C. Maria
author_sort Keet, C. Maria
collection PubMed
description BACKGROUND: Most tutorial ontologies focus on illustrating one aspect of ontology development, notably language features and automated reasoners, but ignore ontology development factors, such as emergent modelling guidelines and ontological principles. Yet, novices replicate examples from the exercise they carry out. Not providing good examples holistically causes the propagation of sub-optimal ontology development, which may negatively affect the quality of a real domain ontology. RESULTS: We identified 22 requirements that a good tutorial ontology should satisfy regarding subject domain, logics and reasoning, and engineering aspects. We developed a set of ontologies about African Wildlife to serve as tutorial ontologies. A majority of the requirements have been met with the set of African Wildlife Ontology tutorial ontologies, which are introduced in this paper. The African Wildlife Ontology is mature and has been used yearly in an ontology engineering course or tutorial since 2010 and is included in a recent ontology engineering textbook with relevant examples and exercises. CONCLUSION: The African Wildlife Ontology provides a wide range of options concerning examples and exercises for ontology engineering well beyond illustrating just language features and automated reasoning. It assists in demonstrating tasks concerning ontology quality, such as alignment to a foundational ontology and satisfying competency questions, versioning, and multilingual ontologies.
format Online
Article
Text
id pubmed-7310311
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-73103112020-06-23 The African wildlife ontology tutorial ontologies Keet, C. Maria J Biomed Semantics Database BACKGROUND: Most tutorial ontologies focus on illustrating one aspect of ontology development, notably language features and automated reasoners, but ignore ontology development factors, such as emergent modelling guidelines and ontological principles. Yet, novices replicate examples from the exercise they carry out. Not providing good examples holistically causes the propagation of sub-optimal ontology development, which may negatively affect the quality of a real domain ontology. RESULTS: We identified 22 requirements that a good tutorial ontology should satisfy regarding subject domain, logics and reasoning, and engineering aspects. We developed a set of ontologies about African Wildlife to serve as tutorial ontologies. A majority of the requirements have been met with the set of African Wildlife Ontology tutorial ontologies, which are introduced in this paper. The African Wildlife Ontology is mature and has been used yearly in an ontology engineering course or tutorial since 2010 and is included in a recent ontology engineering textbook with relevant examples and exercises. CONCLUSION: The African Wildlife Ontology provides a wide range of options concerning examples and exercises for ontology engineering well beyond illustrating just language features and automated reasoning. It assists in demonstrating tasks concerning ontology quality, such as alignment to a foundational ontology and satisfying competency questions, versioning, and multilingual ontologies. BioMed Central 2020-06-23 /pmc/articles/PMC7310311/ /pubmed/32576239 http://dx.doi.org/10.1186/s13326-020-00224-y Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Database
Keet, C. Maria
The African wildlife ontology tutorial ontologies
title The African wildlife ontology tutorial ontologies
title_full The African wildlife ontology tutorial ontologies
title_fullStr The African wildlife ontology tutorial ontologies
title_full_unstemmed The African wildlife ontology tutorial ontologies
title_short The African wildlife ontology tutorial ontologies
title_sort african wildlife ontology tutorial ontologies
topic Database
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7310311/
https://www.ncbi.nlm.nih.gov/pubmed/32576239
http://dx.doi.org/10.1186/s13326-020-00224-y
work_keys_str_mv AT keetcmaria theafricanwildlifeontologytutorialontologies
AT keetcmaria africanwildlifeontologytutorialontologies