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Horizontal gene transfer and silver nanoparticles production in a new Marinomonas strain isolated from the Antarctic psychrophilic ciliate Euplotes focardii

We isolated a novel bacterial strain from a prokaryotic consortium associated to the psychrophilic marine ciliate Euplotes focardii, endemic of the Antarctic coastal seawater. The 16S rDNA sequencing and the phylogenetic analysis revealed the close evolutionary relationship to the Antarctic marine b...

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Autores principales: John, Maria Sindhura, Nagoth, Joseph Amruthraj, Ramasamy, Kesava Priyan, Ballarini, Patrizia, Mozzicafreddo, Matteo, Mancini, Alessio, Telatin, Andrea, Liò, Pietro, Giuli, Gabriele, Natalello, Antonino, Miceli, Cristina, Pucciarelli, Sandra
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7311414/
https://www.ncbi.nlm.nih.gov/pubmed/32576860
http://dx.doi.org/10.1038/s41598-020-66878-x
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author John, Maria Sindhura
Nagoth, Joseph Amruthraj
Ramasamy, Kesava Priyan
Ballarini, Patrizia
Mozzicafreddo, Matteo
Mancini, Alessio
Telatin, Andrea
Liò, Pietro
Giuli, Gabriele
Natalello, Antonino
Miceli, Cristina
Pucciarelli, Sandra
author_facet John, Maria Sindhura
Nagoth, Joseph Amruthraj
Ramasamy, Kesava Priyan
Ballarini, Patrizia
Mozzicafreddo, Matteo
Mancini, Alessio
Telatin, Andrea
Liò, Pietro
Giuli, Gabriele
Natalello, Antonino
Miceli, Cristina
Pucciarelli, Sandra
author_sort John, Maria Sindhura
collection PubMed
description We isolated a novel bacterial strain from a prokaryotic consortium associated to the psychrophilic marine ciliate Euplotes focardii, endemic of the Antarctic coastal seawater. The 16S rDNA sequencing and the phylogenetic analysis revealed the close evolutionary relationship to the Antarctic marine bacterium Marinomonas sp. BSw10506 and the sub antarctic Marinomonas polaris. We named this new strain Marinomonas sp. ef1. The optimal growth temperature in LB medium was 22 °C. Whole genome sequencing and analysis showed a reduced gene loss limited to regions encoding for transposases. Additionally, five genomic islands, e.g. DNA fragments that facilitate horizontal gene transfer phenomena, were identified. Two open reading frames predicted from the genomic islands coded for enzymes belonging to the Nitro-FMN-reductase superfamily. One of these, the putative NAD(P)H nitroreductase YfkO, has been reported to be involved in the bioreduction of silver (Ag) ions and the production of silver nanoparticles (AgNPs). After the Marinomonas sp. ef1 biomass incubation with 1 mM of AgNO(3) at 22 °C, we obtained AgNPs within 24 h. The AgNPs were relatively small in size (50 nm) and had a strong antimicrobial activity against twelve common nosocomial pathogenic microorganisms including Staphylococcus aureus and two Candida strains. To our knowledge, this is the first report of AgNPs biosynthesis by a Marinomonas strain. This biosynthesis may play a dual role in detoxification from silver nitrate and protection from pathogens for the bacterium and potentially for the associated ciliate. Biosynthetic AgNPs also represent a promising alternative to conventional antibiotics against common pathogens.
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spelling pubmed-73114142020-06-25 Horizontal gene transfer and silver nanoparticles production in a new Marinomonas strain isolated from the Antarctic psychrophilic ciliate Euplotes focardii John, Maria Sindhura Nagoth, Joseph Amruthraj Ramasamy, Kesava Priyan Ballarini, Patrizia Mozzicafreddo, Matteo Mancini, Alessio Telatin, Andrea Liò, Pietro Giuli, Gabriele Natalello, Antonino Miceli, Cristina Pucciarelli, Sandra Sci Rep Article We isolated a novel bacterial strain from a prokaryotic consortium associated to the psychrophilic marine ciliate Euplotes focardii, endemic of the Antarctic coastal seawater. The 16S rDNA sequencing and the phylogenetic analysis revealed the close evolutionary relationship to the Antarctic marine bacterium Marinomonas sp. BSw10506 and the sub antarctic Marinomonas polaris. We named this new strain Marinomonas sp. ef1. The optimal growth temperature in LB medium was 22 °C. Whole genome sequencing and analysis showed a reduced gene loss limited to regions encoding for transposases. Additionally, five genomic islands, e.g. DNA fragments that facilitate horizontal gene transfer phenomena, were identified. Two open reading frames predicted from the genomic islands coded for enzymes belonging to the Nitro-FMN-reductase superfamily. One of these, the putative NAD(P)H nitroreductase YfkO, has been reported to be involved in the bioreduction of silver (Ag) ions and the production of silver nanoparticles (AgNPs). After the Marinomonas sp. ef1 biomass incubation with 1 mM of AgNO(3) at 22 °C, we obtained AgNPs within 24 h. The AgNPs were relatively small in size (50 nm) and had a strong antimicrobial activity against twelve common nosocomial pathogenic microorganisms including Staphylococcus aureus and two Candida strains. To our knowledge, this is the first report of AgNPs biosynthesis by a Marinomonas strain. This biosynthesis may play a dual role in detoxification from silver nitrate and protection from pathogens for the bacterium and potentially for the associated ciliate. Biosynthetic AgNPs also represent a promising alternative to conventional antibiotics against common pathogens. Nature Publishing Group UK 2020-06-23 /pmc/articles/PMC7311414/ /pubmed/32576860 http://dx.doi.org/10.1038/s41598-020-66878-x Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
John, Maria Sindhura
Nagoth, Joseph Amruthraj
Ramasamy, Kesava Priyan
Ballarini, Patrizia
Mozzicafreddo, Matteo
Mancini, Alessio
Telatin, Andrea
Liò, Pietro
Giuli, Gabriele
Natalello, Antonino
Miceli, Cristina
Pucciarelli, Sandra
Horizontal gene transfer and silver nanoparticles production in a new Marinomonas strain isolated from the Antarctic psychrophilic ciliate Euplotes focardii
title Horizontal gene transfer and silver nanoparticles production in a new Marinomonas strain isolated from the Antarctic psychrophilic ciliate Euplotes focardii
title_full Horizontal gene transfer and silver nanoparticles production in a new Marinomonas strain isolated from the Antarctic psychrophilic ciliate Euplotes focardii
title_fullStr Horizontal gene transfer and silver nanoparticles production in a new Marinomonas strain isolated from the Antarctic psychrophilic ciliate Euplotes focardii
title_full_unstemmed Horizontal gene transfer and silver nanoparticles production in a new Marinomonas strain isolated from the Antarctic psychrophilic ciliate Euplotes focardii
title_short Horizontal gene transfer and silver nanoparticles production in a new Marinomonas strain isolated from the Antarctic psychrophilic ciliate Euplotes focardii
title_sort horizontal gene transfer and silver nanoparticles production in a new marinomonas strain isolated from the antarctic psychrophilic ciliate euplotes focardii
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7311414/
https://www.ncbi.nlm.nih.gov/pubmed/32576860
http://dx.doi.org/10.1038/s41598-020-66878-x
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