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Unsupervised Method Based on Superpixel Segmentation for Corpus Callosum Parcellation in MRI Scans

In this paper, we introduce an unsupervised method for the parcellation of the Corpus Callosum (CC) from MRI images. Since there are no visible landmarks within the structure that explicit its parcels, non-geometric CC parcellation is a challenging task especially that almost of proposed methods are...

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Autores principales: Jlassi, Amal, ElBedoui, Khaoula, Barhoumi, Walid, Maktouf, Chokri
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7313301/
http://dx.doi.org/10.1007/978-3-030-51517-1_10
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author Jlassi, Amal
ElBedoui, Khaoula
Barhoumi, Walid
Maktouf, Chokri
author_facet Jlassi, Amal
ElBedoui, Khaoula
Barhoumi, Walid
Maktouf, Chokri
author_sort Jlassi, Amal
collection PubMed
description In this paper, we introduce an unsupervised method for the parcellation of the Corpus Callosum (CC) from MRI images. Since there are no visible landmarks within the structure that explicit its parcels, non-geometric CC parcellation is a challenging task especially that almost of proposed methods are geometric or data-based. In fact, in order to subdivide the CC from brain sagittal MRI scans, we adopt the probabilistic neural network as a clustering technique. Then, we use a cluster validity measure based on the maximum entropy (Vmep) to obtain the optimal number of classes. After that, we obtain the isolated CC that we parcel automatically using SLIC (Simple Linear Iterative Clustering) as superpixel segmentation technique. The obtained results on two challenging public datasets prove the performance of the proposed method against geometric methods from the state of the art. Indeed, as best as we know, it is the first work that investigates the validation of a CC parcellation method on ground-truth datasets using many objective metrics.
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spelling pubmed-73133012020-06-24 Unsupervised Method Based on Superpixel Segmentation for Corpus Callosum Parcellation in MRI Scans Jlassi, Amal ElBedoui, Khaoula Barhoumi, Walid Maktouf, Chokri The Impact of Digital Technologies on Public Health in Developed and Developing Countries Article In this paper, we introduce an unsupervised method for the parcellation of the Corpus Callosum (CC) from MRI images. Since there are no visible landmarks within the structure that explicit its parcels, non-geometric CC parcellation is a challenging task especially that almost of proposed methods are geometric or data-based. In fact, in order to subdivide the CC from brain sagittal MRI scans, we adopt the probabilistic neural network as a clustering technique. Then, we use a cluster validity measure based on the maximum entropy (Vmep) to obtain the optimal number of classes. After that, we obtain the isolated CC that we parcel automatically using SLIC (Simple Linear Iterative Clustering) as superpixel segmentation technique. The obtained results on two challenging public datasets prove the performance of the proposed method against geometric methods from the state of the art. Indeed, as best as we know, it is the first work that investigates the validation of a CC parcellation method on ground-truth datasets using many objective metrics. 2020-05-31 /pmc/articles/PMC7313301/ http://dx.doi.org/10.1007/978-3-030-51517-1_10 Text en © The Author(s) 2020 Open Access This chapter is licensed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license and indicate if changes were made. The images or other third party material in this chapter are included in the chapter's Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the chapter's Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder.
spellingShingle Article
Jlassi, Amal
ElBedoui, Khaoula
Barhoumi, Walid
Maktouf, Chokri
Unsupervised Method Based on Superpixel Segmentation for Corpus Callosum Parcellation in MRI Scans
title Unsupervised Method Based on Superpixel Segmentation for Corpus Callosum Parcellation in MRI Scans
title_full Unsupervised Method Based on Superpixel Segmentation for Corpus Callosum Parcellation in MRI Scans
title_fullStr Unsupervised Method Based on Superpixel Segmentation for Corpus Callosum Parcellation in MRI Scans
title_full_unstemmed Unsupervised Method Based on Superpixel Segmentation for Corpus Callosum Parcellation in MRI Scans
title_short Unsupervised Method Based on Superpixel Segmentation for Corpus Callosum Parcellation in MRI Scans
title_sort unsupervised method based on superpixel segmentation for corpus callosum parcellation in mri scans
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7313301/
http://dx.doi.org/10.1007/978-3-030-51517-1_10
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