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Structure and Dynamics of a Thermostable Alcohol Dehydrogenase from the Antarctic Psychrophile Moraxella sp. TAE123
[Image: see text] The structure of a recombinant (His-tagged at C-terminus) alcohol dehydrogenase (MoADH) from the cold-adapted bacterium Moraxella sp. TAE123 has been refined with X-ray diffraction data extending to 1.9 Å resolution. The enzyme assumes a homo-tetrameric structure. Each subunit comp...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7315583/ https://www.ncbi.nlm.nih.gov/pubmed/32596590 http://dx.doi.org/10.1021/acsomega.0c01210 |
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author | Petratos, Kyriacos Gessmann, Renate Daskalakis, Vangelis Papadovasilaki, Maria Papanikolau, Yannis Tsigos, Iason Bouriotis, Vassilis |
author_facet | Petratos, Kyriacos Gessmann, Renate Daskalakis, Vangelis Papadovasilaki, Maria Papanikolau, Yannis Tsigos, Iason Bouriotis, Vassilis |
author_sort | Petratos, Kyriacos |
collection | PubMed |
description | [Image: see text] The structure of a recombinant (His-tagged at C-terminus) alcohol dehydrogenase (MoADH) from the cold-adapted bacterium Moraxella sp. TAE123 has been refined with X-ray diffraction data extending to 1.9 Å resolution. The enzyme assumes a homo-tetrameric structure. Each subunit comprises two distinct structural domains: the catalytic domain (residues 1–150 and 288–340/345) and the nucleotide-binding domain (residues 151–287). There are two Zn(2+) ions in each protein subunit. Two additional zinc ions have been found in the crystal structure between symmetry-related subunits. The structure has been compared with those of homologous enzymes from Geobacillus stearothermophilus (GsADH), Escherichia coli (EcADH), and Thermus sp. ATN1 (ThADH) that thrive in environments of diverse temperatures. Unexpectedly, MoADH has been found active from 10 to at least 53 °C and unfolds at 89 °C according to circular dichroism spectropolarimetry data. MoADH with substrate ethanol exhibits a small value of activation enthalpy ΔH(‡) of 30 kJ mol(–1). Molecular dynamics simulations for single subunits of the closely homologous enzymes MoADH and GsADH performed at 280, 310, and 340 K showed enhanced wide-ranging mobility of MoADH at high temperatures and generally lower but more distinct and localized mobility for GsADH. Principal component analysis of the fluctuations of both ADHs resulted in a prominent open–close transition of the structural domains mainly at 280 K for MoADH and 340 K for GsADH. In conclusion, MoADH is a very thermostable, cold-adapted enzyme and the small value of activation enthalpy allows the enzyme to function adequately at low temperatures. |
format | Online Article Text |
id | pubmed-7315583 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-73155832020-06-26 Structure and Dynamics of a Thermostable Alcohol Dehydrogenase from the Antarctic Psychrophile Moraxella sp. TAE123 Petratos, Kyriacos Gessmann, Renate Daskalakis, Vangelis Papadovasilaki, Maria Papanikolau, Yannis Tsigos, Iason Bouriotis, Vassilis ACS Omega [Image: see text] The structure of a recombinant (His-tagged at C-terminus) alcohol dehydrogenase (MoADH) from the cold-adapted bacterium Moraxella sp. TAE123 has been refined with X-ray diffraction data extending to 1.9 Å resolution. The enzyme assumes a homo-tetrameric structure. Each subunit comprises two distinct structural domains: the catalytic domain (residues 1–150 and 288–340/345) and the nucleotide-binding domain (residues 151–287). There are two Zn(2+) ions in each protein subunit. Two additional zinc ions have been found in the crystal structure between symmetry-related subunits. The structure has been compared with those of homologous enzymes from Geobacillus stearothermophilus (GsADH), Escherichia coli (EcADH), and Thermus sp. ATN1 (ThADH) that thrive in environments of diverse temperatures. Unexpectedly, MoADH has been found active from 10 to at least 53 °C and unfolds at 89 °C according to circular dichroism spectropolarimetry data. MoADH with substrate ethanol exhibits a small value of activation enthalpy ΔH(‡) of 30 kJ mol(–1). Molecular dynamics simulations for single subunits of the closely homologous enzymes MoADH and GsADH performed at 280, 310, and 340 K showed enhanced wide-ranging mobility of MoADH at high temperatures and generally lower but more distinct and localized mobility for GsADH. Principal component analysis of the fluctuations of both ADHs resulted in a prominent open–close transition of the structural domains mainly at 280 K for MoADH and 340 K for GsADH. In conclusion, MoADH is a very thermostable, cold-adapted enzyme and the small value of activation enthalpy allows the enzyme to function adequately at low temperatures. American Chemical Society 2020-06-08 /pmc/articles/PMC7315583/ /pubmed/32596590 http://dx.doi.org/10.1021/acsomega.0c01210 Text en Copyright © 2020 American Chemical Society This is an open access article published under a Creative Commons Attribution (CC-BY) License (http://pubs.acs.org/page/policy/authorchoice_ccby_termsofuse.html) , which permits unrestricted use, distribution and reproduction in any medium, provided the author and source are cited. |
spellingShingle | Petratos, Kyriacos Gessmann, Renate Daskalakis, Vangelis Papadovasilaki, Maria Papanikolau, Yannis Tsigos, Iason Bouriotis, Vassilis Structure and Dynamics of a Thermostable Alcohol Dehydrogenase from the Antarctic Psychrophile Moraxella sp. TAE123 |
title | Structure and Dynamics of a Thermostable Alcohol Dehydrogenase
from the Antarctic Psychrophile Moraxella sp. TAE123 |
title_full | Structure and Dynamics of a Thermostable Alcohol Dehydrogenase
from the Antarctic Psychrophile Moraxella sp. TAE123 |
title_fullStr | Structure and Dynamics of a Thermostable Alcohol Dehydrogenase
from the Antarctic Psychrophile Moraxella sp. TAE123 |
title_full_unstemmed | Structure and Dynamics of a Thermostable Alcohol Dehydrogenase
from the Antarctic Psychrophile Moraxella sp. TAE123 |
title_short | Structure and Dynamics of a Thermostable Alcohol Dehydrogenase
from the Antarctic Psychrophile Moraxella sp. TAE123 |
title_sort | structure and dynamics of a thermostable alcohol dehydrogenase
from the antarctic psychrophile moraxella sp. tae123 |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7315583/ https://www.ncbi.nlm.nih.gov/pubmed/32596590 http://dx.doi.org/10.1021/acsomega.0c01210 |
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