Cargando…

Forecasting COVID-19 pandemic: A data-driven analysis

In this paper, a new Susceptible-Exposed-Symptomatic Infectious-Asymptomatic Infectious-Quarantined-Hospitalized-Recovered-Dead (SEI(D)I(U)QHRD) deterministic compartmental model has been proposed and calibrated for interpreting the transmission dynamics of the novel coronavirus disease (COVID-19)....

Descripción completa

Detalles Bibliográficos
Autor principal: Nabi, Khondoker Nazmoon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7315964/
https://www.ncbi.nlm.nih.gov/pubmed/32834601
http://dx.doi.org/10.1016/j.chaos.2020.110046
_version_ 1783550353621385216
author Nabi, Khondoker Nazmoon
author_facet Nabi, Khondoker Nazmoon
author_sort Nabi, Khondoker Nazmoon
collection PubMed
description In this paper, a new Susceptible-Exposed-Symptomatic Infectious-Asymptomatic Infectious-Quarantined-Hospitalized-Recovered-Dead (SEI(D)I(U)QHRD) deterministic compartmental model has been proposed and calibrated for interpreting the transmission dynamics of the novel coronavirus disease (COVID-19). The purpose of this study is to give tentative predictions of the epidemic peak for Russia, Brazil, India and Bangladesh which could become the next COVID-19 hotspots in no time by using a newly developed algorithm based on well-known Trust-region-reflective (TRR) algorithm, which is one of the robust real-time optimization techniques. Based on the publicly available epidemiological data from late January until 10 May, it has been estimated that the number of daily new symptomatic infectious cases for the above mentioned countries could reach the peak around the middle of June with the peak size of  ∼ 15, 774 (95% CI, 12,814–16,734) symptomatic infectious cases in Russia,  ∼ 26, 449 (95% CI, 25,489–31,409) cases in Brazil,  ∼ 9, 504 (95% CI, 8,378–13,630) cases in India and  ∼ 2, 209 (95% CI, 2,078–2,840) cases in Bangladesh if current epidemic trends hold. As of May 11, 2020, incorporating the infectiousness capability of asymptomatic carriers, our analysis estimates the value of the basic reproductive number (R(0)) was found to be  ∼ 4.234 (95% CI, 3.764–4.7) in Russia,  ∼ 5.347 (95% CI, 4.737–5.95) in Brazil,  ∼ 5.218 (95% CI, 4.56–5.81) in India,  ∼ 4.649 (95% CI, 4.17–5.12) in the United Kingdom and  ∼ 3.53 (95% CI, 3.12–3.94) in Bangladesh. Moreover, Latin hypercube sampling-partial rank correlation coefficient (LHS-PRCC) which is a global sensitivity analysis (GSA) method has been applied to quantify the uncertainty of our model mechanisms, which elucidates that for Russia, the recovery rate of undetected asymptomatic carriers, the rate of getting home-quarantined or self-quarantined and the transition rate from quarantined class to susceptible class are the most influential parameters, whereas the rate of getting home-quarantined or self-quarantined and the inverse of the COVID-19 incubation period are highly sensitive parameters in Brazil, India, Bangladesh and the United Kingdom which could significantly affect the transmission dynamics of the novel coronavirus disease (COVID-19). Our analysis also suggests that relaxing social distancing restrictions too quickly could exacerbate the epidemic outbreak in the above-mentioned countries.
format Online
Article
Text
id pubmed-7315964
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Elsevier Ltd.
record_format MEDLINE/PubMed
spelling pubmed-73159642020-06-25 Forecasting COVID-19 pandemic: A data-driven analysis Nabi, Khondoker Nazmoon Chaos Solitons Fractals Article In this paper, a new Susceptible-Exposed-Symptomatic Infectious-Asymptomatic Infectious-Quarantined-Hospitalized-Recovered-Dead (SEI(D)I(U)QHRD) deterministic compartmental model has been proposed and calibrated for interpreting the transmission dynamics of the novel coronavirus disease (COVID-19). The purpose of this study is to give tentative predictions of the epidemic peak for Russia, Brazil, India and Bangladesh which could become the next COVID-19 hotspots in no time by using a newly developed algorithm based on well-known Trust-region-reflective (TRR) algorithm, which is one of the robust real-time optimization techniques. Based on the publicly available epidemiological data from late January until 10 May, it has been estimated that the number of daily new symptomatic infectious cases for the above mentioned countries could reach the peak around the middle of June with the peak size of  ∼ 15, 774 (95% CI, 12,814–16,734) symptomatic infectious cases in Russia,  ∼ 26, 449 (95% CI, 25,489–31,409) cases in Brazil,  ∼ 9, 504 (95% CI, 8,378–13,630) cases in India and  ∼ 2, 209 (95% CI, 2,078–2,840) cases in Bangladesh if current epidemic trends hold. As of May 11, 2020, incorporating the infectiousness capability of asymptomatic carriers, our analysis estimates the value of the basic reproductive number (R(0)) was found to be  ∼ 4.234 (95% CI, 3.764–4.7) in Russia,  ∼ 5.347 (95% CI, 4.737–5.95) in Brazil,  ∼ 5.218 (95% CI, 4.56–5.81) in India,  ∼ 4.649 (95% CI, 4.17–5.12) in the United Kingdom and  ∼ 3.53 (95% CI, 3.12–3.94) in Bangladesh. Moreover, Latin hypercube sampling-partial rank correlation coefficient (LHS-PRCC) which is a global sensitivity analysis (GSA) method has been applied to quantify the uncertainty of our model mechanisms, which elucidates that for Russia, the recovery rate of undetected asymptomatic carriers, the rate of getting home-quarantined or self-quarantined and the transition rate from quarantined class to susceptible class are the most influential parameters, whereas the rate of getting home-quarantined or self-quarantined and the inverse of the COVID-19 incubation period are highly sensitive parameters in Brazil, India, Bangladesh and the United Kingdom which could significantly affect the transmission dynamics of the novel coronavirus disease (COVID-19). Our analysis also suggests that relaxing social distancing restrictions too quickly could exacerbate the epidemic outbreak in the above-mentioned countries. Elsevier Ltd. 2020-10 2020-06-25 /pmc/articles/PMC7315964/ /pubmed/32834601 http://dx.doi.org/10.1016/j.chaos.2020.110046 Text en © 2020 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Nabi, Khondoker Nazmoon
Forecasting COVID-19 pandemic: A data-driven analysis
title Forecasting COVID-19 pandemic: A data-driven analysis
title_full Forecasting COVID-19 pandemic: A data-driven analysis
title_fullStr Forecasting COVID-19 pandemic: A data-driven analysis
title_full_unstemmed Forecasting COVID-19 pandemic: A data-driven analysis
title_short Forecasting COVID-19 pandemic: A data-driven analysis
title_sort forecasting covid-19 pandemic: a data-driven analysis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7315964/
https://www.ncbi.nlm.nih.gov/pubmed/32834601
http://dx.doi.org/10.1016/j.chaos.2020.110046
work_keys_str_mv AT nabikhondokernazmoon forecastingcovid19pandemicadatadrivenanalysis