COVID-KOP: Integrating Emerging COVID-19 Data with the ROBOKOP Database

Mostrar otras versiones (1)

In response to the COVID-19 pandemic, we established COVID-KOP, a new knowledgebase integrating the existing ROBOKOP biomedical knowledge graph with information from recent biomedical literature on COVID-19 annotated in the CORD-19 collection. COVID-KOP can be used effectively to test new hypotheses...

Descripción completa

Detalles Bibliográficos
Autores principales: Korn, Daniel, Bobrowski, Tesia, Li, Michael, Kebede, Yaphet, Wang, Patrick, Owen, Phillips, Vaidya, Gaurav, Muratov, Eugene, Chirkova, Rada, Bizon, Chris, Tropsha, Alexander
Formato: Online Artículo Texto
Lenguaje:English
Publicado: ChemRxiv 2020
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7316095/
https://www.ncbi.nlm.nih.gov/pubmed/32601612
http://dx.doi.org/10.26434/chemrxiv.12462623
_version_ 1783550380681986048
author Korn, Daniel
Bobrowski, Tesia
Li, Michael
Kebede, Yaphet
Wang, Patrick
Owen, Phillips
Vaidya, Gaurav
Muratov, Eugene
Chirkova, Rada
Bizon, Chris
Tropsha, Alexander
author_facet Korn, Daniel
Bobrowski, Tesia
Li, Michael
Kebede, Yaphet
Wang, Patrick
Owen, Phillips
Vaidya, Gaurav
Muratov, Eugene
Chirkova, Rada
Bizon, Chris
Tropsha, Alexander
author_sort Korn, Daniel
collection PubMed
description In response to the COVID-19 pandemic, we established COVID-KOP, a new knowledgebase integrating the existing ROBOKOP biomedical knowledge graph with information from recent biomedical literature on COVID-19 annotated in the CORD-19 collection. COVID-KOP can be used effectively to test new hypotheses concerning repurposing of known drugs and clinical drug candidates against COVID-19. COVID-KOP is freely accessible at https://covidkop.renci.org/. For code and instructions for the original ROBOKOP, see: https://github.com/NCATS-Gamma/robokop.
format Online
Article
Text
id pubmed-7316095
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher ChemRxiv
record_format MEDLINE/PubMed
spelling pubmed-73160952020-06-29 COVID-KOP: Integrating Emerging COVID-19 Data with the ROBOKOP Database Korn, Daniel Bobrowski, Tesia Li, Michael Kebede, Yaphet Wang, Patrick Owen, Phillips Vaidya, Gaurav Muratov, Eugene Chirkova, Rada Bizon, Chris Tropsha, Alexander ChemRxiv Article In response to the COVID-19 pandemic, we established COVID-KOP, a new knowledgebase integrating the existing ROBOKOP biomedical knowledge graph with information from recent biomedical literature on COVID-19 annotated in the CORD-19 collection. COVID-KOP can be used effectively to test new hypotheses concerning repurposing of known drugs and clinical drug candidates against COVID-19. COVID-KOP is freely accessible at https://covidkop.renci.org/. For code and instructions for the original ROBOKOP, see: https://github.com/NCATS-Gamma/robokop. ChemRxiv 2020-06-18 /pmc/articles/PMC7316095/ /pubmed/32601612 http://dx.doi.org/10.26434/chemrxiv.12462623 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which allows reusers to copy and distribute the material in any medium or format in unadapted form only, for noncommercial purposes only, and only so long as attribution is given to the creator.
spellingShingle Article
Korn, Daniel
Bobrowski, Tesia
Li, Michael
Kebede, Yaphet
Wang, Patrick
Owen, Phillips
Vaidya, Gaurav
Muratov, Eugene
Chirkova, Rada
Bizon, Chris
Tropsha, Alexander
COVID-KOP: Integrating Emerging COVID-19 Data with the ROBOKOP Database
title COVID-KOP: Integrating Emerging COVID-19 Data with the ROBOKOP Database
title_full COVID-KOP: Integrating Emerging COVID-19 Data with the ROBOKOP Database
title_fullStr COVID-KOP: Integrating Emerging COVID-19 Data with the ROBOKOP Database
title_full_unstemmed COVID-KOP: Integrating Emerging COVID-19 Data with the ROBOKOP Database
title_short COVID-KOP: Integrating Emerging COVID-19 Data with the ROBOKOP Database
title_sort covid-kop: integrating emerging covid-19 data with the robokop database
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7316095/
https://www.ncbi.nlm.nih.gov/pubmed/32601612
http://dx.doi.org/10.26434/chemrxiv.12462623
work_keys_str_mv AT korndaniel covidkopintegratingemergingcovid19datawiththerobokopdatabase
AT bobrowskitesia covidkopintegratingemergingcovid19datawiththerobokopdatabase
AT limichael covidkopintegratingemergingcovid19datawiththerobokopdatabase
AT kebedeyaphet covidkopintegratingemergingcovid19datawiththerobokopdatabase
AT wangpatrick covidkopintegratingemergingcovid19datawiththerobokopdatabase
AT owenphillips covidkopintegratingemergingcovid19datawiththerobokopdatabase
AT vaidyagaurav covidkopintegratingemergingcovid19datawiththerobokopdatabase
AT muratoveugene covidkopintegratingemergingcovid19datawiththerobokopdatabase
AT chirkovarada covidkopintegratingemergingcovid19datawiththerobokopdatabase
AT bizonchris covidkopintegratingemergingcovid19datawiththerobokopdatabase
AT tropshaalexander covidkopintegratingemergingcovid19datawiththerobokopdatabase

Ejemplares similares