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The potential of UAV-borne spectral and textural information for predicting aboveground biomass and N fixation in legume-grass mixtures

Organic farmers, who rely on legumes as an external nitrogen (N) source, need a fast and easy on-the-go measurement technique to determine harvestable biomass and the amount of fixed N (N(Fix)) for numerous farm management decisions. Especially clover- and lucerne-grass mixtures play an important ro...

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Autores principales: Grüner, Esther, Wachendorf, Michael, Astor, Thomas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7316270/
https://www.ncbi.nlm.nih.gov/pubmed/32584839
http://dx.doi.org/10.1371/journal.pone.0234703
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author Grüner, Esther
Wachendorf, Michael
Astor, Thomas
author_facet Grüner, Esther
Wachendorf, Michael
Astor, Thomas
author_sort Grüner, Esther
collection PubMed
description Organic farmers, who rely on legumes as an external nitrogen (N) source, need a fast and easy on-the-go measurement technique to determine harvestable biomass and the amount of fixed N (N(Fix)) for numerous farm management decisions. Especially clover- and lucerne-grass mixtures play an important role in the organic crop rotation under temperate European climate conditions. Multispectral sensors mounted on unmanned aerial vehicles (UAVs) are new promising tools for a non-destructive assessment of crop and grassland traits on large and remote areas. One disadvantage of multispectral information and derived vegetations indices is, that both ignore spatial relationships of pixels to each other in the image. This gap can be filled by texture features from a grey level co-occurrence matrix. The aim of this multi-temporal field study was to provide aboveground biomass and N(Fix) estimation models for two legume-grass mixtures through a whole vegetation period based on UAV multispectral information. The prediction models covered different proportions of legumes (0–100% legumes) to represent the variable conditions in practical farming. Furthermore, the study compared prediction models with and without the inclusion of texture features. As multispectral data usually suffers from multicollinearity, two machine learning algorithms, Partial Least Square and Random Forest (RF) regression, were used. The results showed, that biomass prediction accuracy for the whole dataset as well as for crop-specific models were substantially improved by the inclusion of texture features. The best model was generated for the whole dataset by RF with an rRMSE of 10%. For N(Fix) prediction accuracy of the best model was based on RF including texture (rRMSEP = 18%), which was not consistent with crop specific models.
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spelling pubmed-73162702020-06-30 The potential of UAV-borne spectral and textural information for predicting aboveground biomass and N fixation in legume-grass mixtures Grüner, Esther Wachendorf, Michael Astor, Thomas PLoS One Research Article Organic farmers, who rely on legumes as an external nitrogen (N) source, need a fast and easy on-the-go measurement technique to determine harvestable biomass and the amount of fixed N (N(Fix)) for numerous farm management decisions. Especially clover- and lucerne-grass mixtures play an important role in the organic crop rotation under temperate European climate conditions. Multispectral sensors mounted on unmanned aerial vehicles (UAVs) are new promising tools for a non-destructive assessment of crop and grassland traits on large and remote areas. One disadvantage of multispectral information and derived vegetations indices is, that both ignore spatial relationships of pixels to each other in the image. This gap can be filled by texture features from a grey level co-occurrence matrix. The aim of this multi-temporal field study was to provide aboveground biomass and N(Fix) estimation models for two legume-grass mixtures through a whole vegetation period based on UAV multispectral information. The prediction models covered different proportions of legumes (0–100% legumes) to represent the variable conditions in practical farming. Furthermore, the study compared prediction models with and without the inclusion of texture features. As multispectral data usually suffers from multicollinearity, two machine learning algorithms, Partial Least Square and Random Forest (RF) regression, were used. The results showed, that biomass prediction accuracy for the whole dataset as well as for crop-specific models were substantially improved by the inclusion of texture features. The best model was generated for the whole dataset by RF with an rRMSE of 10%. For N(Fix) prediction accuracy of the best model was based on RF including texture (rRMSEP = 18%), which was not consistent with crop specific models. Public Library of Science 2020-06-25 /pmc/articles/PMC7316270/ /pubmed/32584839 http://dx.doi.org/10.1371/journal.pone.0234703 Text en © 2020 Grüner et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Grüner, Esther
Wachendorf, Michael
Astor, Thomas
The potential of UAV-borne spectral and textural information for predicting aboveground biomass and N fixation in legume-grass mixtures
title The potential of UAV-borne spectral and textural information for predicting aboveground biomass and N fixation in legume-grass mixtures
title_full The potential of UAV-borne spectral and textural information for predicting aboveground biomass and N fixation in legume-grass mixtures
title_fullStr The potential of UAV-borne spectral and textural information for predicting aboveground biomass and N fixation in legume-grass mixtures
title_full_unstemmed The potential of UAV-borne spectral and textural information for predicting aboveground biomass and N fixation in legume-grass mixtures
title_short The potential of UAV-borne spectral and textural information for predicting aboveground biomass and N fixation in legume-grass mixtures
title_sort potential of uav-borne spectral and textural information for predicting aboveground biomass and n fixation in legume-grass mixtures
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7316270/
https://www.ncbi.nlm.nih.gov/pubmed/32584839
http://dx.doi.org/10.1371/journal.pone.0234703
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