Cargando…

Genome Sequence of SARS-CoV-2 Isolate Cali-01, from Colombia, Obtained Using Oxford Nanopore MinION Sequencing

We report the genome sequence of a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) isolate obtained from a patient with symptoms of coronavirus disease 2019 (COVID-19) who was infected in Cali, Colombia. The patient had no recent travel record and did not require hospitalization. The vi...

Descripción completa

Detalles Bibliográficos
Autores principales:	Lopez-Alvarez, Diana, Parra, Beatriz, Cuellar, Wilmer J.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	American Society for Microbiology 2020
Materias:	Genome Sequences
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7317109/ https://www.ncbi.nlm.nih.gov/pubmed/32586872 http://dx.doi.org/10.1128/MRA.00573-20

Ejemplares similares

Genome Sequences of Six SARS-CoV-2 Strains Isolated in Morocco, Obtained Using Oxford Nanopore MinION Technology
por: Laamarti, Meriem, et al.
Publicado: (2020)

Complete Genome Sequence of the Plant Pathogen Ralstonia solanacearum Strain CIAT-078, Isolated in Colombia, Obtained Using Oxford Nanopore Technology
por: López-Alvarez, Diana, et al.
Publicado: (2020)

Complete Genome Sequence of Tetracycline-Resistant Serratia liquefaciens S1, Isolated from Mixed Greens, Obtained Using Illumina MiSeq and Oxford Nanopore MinION Sequencing
por: Stein, Maria, et al.
Publicado: (2020)

Genome Sequencing of Sub-Arctic Mesomycetozoean Sphaeroforma sirkka Strain B5, Performed with the Oxford Nanopore minION and Illumina HiSeq Systems
por: Ducluzeau, A.-L., et al.
Publicado: (2018)

Oxford Nanopore MinION Sequencing and Genome Assembly
por: Lu, Hengyun, et al.
Publicado: (2016)

Complete Genome Sequences of Three Listeria monocytogenes Strains from Microgreens Obtained with MinION and MiSeq Sequencing
por: Naushad, Sohail, et al.
Publicado: (2022)

The Oxford Nanopore MinION: delivery of nanopore sequencing to the genomics community
por: Jain, Miten, et al.
Publicado: (2016)

Erratum to: The Oxford Nanopore MinION: delivery of nanopore sequencing to the genomics community
por: Jain, Miten, et al.
Publicado: (2016)

Closed Genome Sequences and Antimicrobial Resistance Profiles of Eight Wild Bird Salmonella Isolates Obtained with MinION and Illumina MiSeq Sequencing
por: Naushad, Sohail, et al.
Publicado: (2020)

Complete Genome Sequence of Caulobacter sp. Strain S6, Obtained Using Oxford Nanopore and Illumina Sequencing
por: Zhang, Cuiyang, et al.
Publicado: (2021)

Closed Genome Sequences of Clinical Neisseria gonorrhoeae Strains Obtained from Combined Oxford Nanopore and Illumina Sequencing
por: White, Richard C., et al.
Publicado: (2019)

Complete Genome Sequence of a Canadian Klebsiella michiganensis Strain, Obtained Using Oxford Nanopore Technologies Sequencing
por: Kang, Mingsong, et al.
Publicado: (2020)

Genome Sequences of Five Indian Canine Rabies Virus Isolates Obtained Using Oxford Nanopore Technologies Sequencing
por: Kumar, Ankeet, et al.
Publicado: (2022)

Assessing the performance of the Oxford Nanopore Technologies MinION
por: Laver, T., et al.
Publicado: (2015)

Evaluation of Oxford Nanopore’s MinION Sequencing Device for Microbial Whole Genome Sequencing Applications
por: Tyler, Andrea D., et al.
Publicado: (2018)

Draft Genome Sequence of Fusarium oxysporum f. sp. cubense Tropical Race 4 from Peru, Obtained by Nanopore and Illumina Hybrid Assembly
por: Leiva, Ana M., et al.
Publicado: (2022)

Draft Genome Sequences of the Highly Halotolerant Strain Zygosaccharomyces rouxii ATCC 42981 and the Novel Allodiploid Strain Zygosaccharomyces sapae ATB301(T) Obtained Using the MinION Platform
por: Bizzarri, Melissa, et al.
Publicado: (2018)

MinION nanopore sequencing of an influenza genome
por: Wang, Jing, et al.
Publicado: (2015)

Assessing the utility of the Oxford Nanopore MinION for snake venom gland cDNA sequencing
por: Hargreaves, Adam D., et al.
Publicado: (2015)

Benchmarking of the Oxford Nanopore MinION sequencing for quantitative and qualitative assessment of cDNA populations
por: Oikonomopoulos, Spyros, et al.
Publicado: (2016)

Complete sequence verification of plasmid DNA using the Oxford Nanopore Technologies’ MinION device
por: Brown, Scott D., et al.
Publicado: (2023)

Complete Genome Sequence of Rhodococcus sp. Strain W8901, a Human Clinical Specimen, Assembled Using MiSeq and MinION Sequence Data
por: Gulvik, Christopher A., et al.
Publicado: (2021)

Complete and Circularized Genome Assembly of a Human Isolate of Vibrio navarrensis Biotype pommerensis with MiSeq and MinION Sequence Data
por: Schwartz, Keike, et al.
Publicado: (2021)

Oxford Nanopore MinION Direct RNA-Seq for Systems Biology
por: Pyatnitskiy, Mikhail A., et al.
Publicado: (2021)

Nanopore-Based Complete Genome Sequence of a Sri Lankan Cassava Mosaic Virus (Geminivirus) Strain from Thailand
por: Leiva, Ana M., et al.
Publicado: (2020)

Closed Genome Sequences of Two Clostridium botulinum Strains Obtained by Nanopore Sequencing
por: Gonzalez-Escalona, Narjol, et al.
Publicado: (2018)

De novo assembly and annotation of three Leptosphaeria genomes using Oxford Nanopore MinION sequencing
por: Dutreux, Fabien, et al.
Publicado: (2018)

Updates and Comparative Analysis of the Mitochondrial Genomes of Paracoccidioides spp. Using Oxford Nanopore MinION Sequencing
por: Misas, Elizabeth, et al.
Publicado: (2020)

Portable Rabies Virus Sequencing in Canine Rabies Endemic Countries Using the Oxford Nanopore MinION
por: Gigante, Crystal M., et al.
Publicado: (2020)

Improved data analysis for the MinION nanopore sequencer
por: Jain, Miten, et al.
Publicado: (2015)

Resolving plasmid structures in Enterobacteriaceae using the MinION nanopore sequencer: assessment of MinION and MinION/Illumina hybrid data assembly approaches
por: George, Sophie, et al.
Publicado: (2017)

High-Quality de Novo Genome Assembly of the Dekkera bruxellensis Yeast Using Nanopore MinION Sequencing
por: Fournier, Téo, et al.
Publicado: (2017)

Complete Genome Sequence of Clostridioides difficile Ribotype 255 Strain Mta-79, Assembled Using Oxford Nanopore and Illumina Sequencing
por: Spinler, Jennifer K., et al.
Publicado: (2019)

Antimicrobial resistance prediction and phylogenetic analysis of Neisseria gonorrhoeae isolates using the Oxford Nanopore MinION sequencer
por: Golparian, Daniel, et al.
Publicado: (2018)

de novo assembly and population genomic survey of natural yeast isolates with the Oxford Nanopore MinION sequencer
por: Istace, Benjamin, et al.
Publicado: (2017)

Environmental DNA sequencing dataset from Lake Erie algal blooms using Oxford Nanopore MinION
por: Koeppel, Alexander F., et al.
Publicado: (2022)

Complete and Circularized Genome Assemblies of the Kroppenstedtia eburnea Genus Type Strain and the Kroppenstedtia pulmonis Species Type Strain with MiSeq and MinION Sequence Data
por: Gulvik, Christopher A., et al.
Publicado: (2020)

Forensic SNP Genotyping using Nanopore MinION Sequencing
por: Cornelis, Senne, et al.
Publicado: (2017)

Corrigendum: Resolving plasmid structures in Enterobacteriaceae using the MinION nanopore sequencer: assessment of MinION and MinION/Illumina hybrid data assembly approaches
por: George, Sophie, et al.
Publicado: (2018)

Closed Genome Sequence of Salmonella enterica Serovar Richmond Strain CFSAN000191, Obtained with Nanopore Sequencing
por: González-Escalona, Narjol, et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_iqg1q7mmc8b3vee2g9jl8hdvl1