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Comprehensive 3D phenotyping reveals continuous morphological variation across genetically diverse sorghum inflorescences

●. Inflorescence architecture in plants is often complex and challenging to quantify, particularly for inflorescences of cereal grasses. Methods for capturing inflorescence architecture and for analyzing the resulting data are limited to a few easily captured parameters that may miss the rich underl...

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Autores principales: Li, Mao, Shao, Mon‐Ray, Zeng, Dan, Ju, Tao, Kellogg, Elizabeth A., Topp, Christopher N.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7317572/
https://www.ncbi.nlm.nih.gov/pubmed/32162345
http://dx.doi.org/10.1111/nph.16533
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author Li, Mao
Shao, Mon‐Ray
Zeng, Dan
Ju, Tao
Kellogg, Elizabeth A.
Topp, Christopher N.
author_facet Li, Mao
Shao, Mon‐Ray
Zeng, Dan
Ju, Tao
Kellogg, Elizabeth A.
Topp, Christopher N.
author_sort Li, Mao
collection PubMed
description ●. Inflorescence architecture in plants is often complex and challenging to quantify, particularly for inflorescences of cereal grasses. Methods for capturing inflorescence architecture and for analyzing the resulting data are limited to a few easily captured parameters that may miss the rich underlying diversity. ●. Here, we apply X‐ray computed tomography combined with detailed morphometrics, offering new imaging and computational tools to analyze three‐dimensional inflorescence architecture. To show the power of this approach, we focus on the panicles of Sorghum bicolor, which vary extensively in numbers, lengths, and angles of primary branches, as well as the three‐dimensional shape, size, and distribution of the seed. ●. We imaged and comprehensively evaluated the panicle morphology of 55 sorghum accessions that represent the five botanical races in the most common classification system of the species, defined by genetic data. We used our data to determine the reliability of the morphological characters for assigning specimens to race and found that seed features were particularly informative. ●. However, the extensive overlap between botanical races in multivariate trait space indicates that the phenotypic range of each group extends well beyond its overall genetic background, indicating unexpectedly weak correlation between morphology, genetic identity, and domestication history.
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spelling pubmed-73175722020-06-29 Comprehensive 3D phenotyping reveals continuous morphological variation across genetically diverse sorghum inflorescences Li, Mao Shao, Mon‐Ray Zeng, Dan Ju, Tao Kellogg, Elizabeth A. Topp, Christopher N. New Phytol Research ●. Inflorescence architecture in plants is often complex and challenging to quantify, particularly for inflorescences of cereal grasses. Methods for capturing inflorescence architecture and for analyzing the resulting data are limited to a few easily captured parameters that may miss the rich underlying diversity. ●. Here, we apply X‐ray computed tomography combined with detailed morphometrics, offering new imaging and computational tools to analyze three‐dimensional inflorescence architecture. To show the power of this approach, we focus on the panicles of Sorghum bicolor, which vary extensively in numbers, lengths, and angles of primary branches, as well as the three‐dimensional shape, size, and distribution of the seed. ●. We imaged and comprehensively evaluated the panicle morphology of 55 sorghum accessions that represent the five botanical races in the most common classification system of the species, defined by genetic data. We used our data to determine the reliability of the morphological characters for assigning specimens to race and found that seed features were particularly informative. ●. However, the extensive overlap between botanical races in multivariate trait space indicates that the phenotypic range of each group extends well beyond its overall genetic background, indicating unexpectedly weak correlation between morphology, genetic identity, and domestication history. John Wiley and Sons Inc. 2020-04-16 2020-06 /pmc/articles/PMC7317572/ /pubmed/32162345 http://dx.doi.org/10.1111/nph.16533 Text en © 2020 The Authors. New Phytologist © 2020 New Phytologist Trust This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research
Li, Mao
Shao, Mon‐Ray
Zeng, Dan
Ju, Tao
Kellogg, Elizabeth A.
Topp, Christopher N.
Comprehensive 3D phenotyping reveals continuous morphological variation across genetically diverse sorghum inflorescences
title Comprehensive 3D phenotyping reveals continuous morphological variation across genetically diverse sorghum inflorescences
title_full Comprehensive 3D phenotyping reveals continuous morphological variation across genetically diverse sorghum inflorescences
title_fullStr Comprehensive 3D phenotyping reveals continuous morphological variation across genetically diverse sorghum inflorescences
title_full_unstemmed Comprehensive 3D phenotyping reveals continuous morphological variation across genetically diverse sorghum inflorescences
title_short Comprehensive 3D phenotyping reveals continuous morphological variation across genetically diverse sorghum inflorescences
title_sort comprehensive 3d phenotyping reveals continuous morphological variation across genetically diverse sorghum inflorescences
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7317572/
https://www.ncbi.nlm.nih.gov/pubmed/32162345
http://dx.doi.org/10.1111/nph.16533
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