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Proton‐Detected Solid‐State NMR of the Cell‐Free Synthesized α‐Helical Transmembrane Protein NS4B from Hepatitis C Virus

Proton‐detected 100 kHz magic‐angle‐spinning (MAS) solid‐state NMR is an emerging analysis method for proteins with only hundreds of microgram quantities, and thus allows structural investigation of eukaryotic membrane proteins. This is the case for the cell‐free synthesized hepatitis C virus (HCV)...

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Autores principales: Jirasko, Vlastimil, Lakomek, Nils‐Alexander, Penzel, Susanne, Fogeron, Marie‐Laure, Bartenschlager, Ralf, Meier, Beat H., Böckmann, Anja
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7318649/
https://www.ncbi.nlm.nih.gov/pubmed/31850615
http://dx.doi.org/10.1002/cbic.201900765
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author Jirasko, Vlastimil
Lakomek, Nils‐Alexander
Penzel, Susanne
Fogeron, Marie‐Laure
Bartenschlager, Ralf
Meier, Beat H.
Böckmann, Anja
author_facet Jirasko, Vlastimil
Lakomek, Nils‐Alexander
Penzel, Susanne
Fogeron, Marie‐Laure
Bartenschlager, Ralf
Meier, Beat H.
Böckmann, Anja
author_sort Jirasko, Vlastimil
collection PubMed
description Proton‐detected 100 kHz magic‐angle‐spinning (MAS) solid‐state NMR is an emerging analysis method for proteins with only hundreds of microgram quantities, and thus allows structural investigation of eukaryotic membrane proteins. This is the case for the cell‐free synthesized hepatitis C virus (HCV) nonstructural membrane protein 4B (NS4B). We demonstrate NS4B sample optimization using fast reconstitution schemes that enable lipid‐environment screening directly by NMR. 2D spectra and relaxation properties guide the choice of the best sample preparation to record 2D (1)H‐detected (1)H,(15)N and 3D (1)H,(13)C,(15)N correlation experiments with linewidths and sensitivity suitable to initiate sequential assignments. Amino‐acid‐selectively labeled NS4B can be readily obtained using cell‐free synthesis, opening the door to combinatorial labeling approaches which should enable structural studies.
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spelling pubmed-73186492020-06-29 Proton‐Detected Solid‐State NMR of the Cell‐Free Synthesized α‐Helical Transmembrane Protein NS4B from Hepatitis C Virus Jirasko, Vlastimil Lakomek, Nils‐Alexander Penzel, Susanne Fogeron, Marie‐Laure Bartenschlager, Ralf Meier, Beat H. Böckmann, Anja Chembiochem Full Papers Proton‐detected 100 kHz magic‐angle‐spinning (MAS) solid‐state NMR is an emerging analysis method for proteins with only hundreds of microgram quantities, and thus allows structural investigation of eukaryotic membrane proteins. This is the case for the cell‐free synthesized hepatitis C virus (HCV) nonstructural membrane protein 4B (NS4B). We demonstrate NS4B sample optimization using fast reconstitution schemes that enable lipid‐environment screening directly by NMR. 2D spectra and relaxation properties guide the choice of the best sample preparation to record 2D (1)H‐detected (1)H,(15)N and 3D (1)H,(13)C,(15)N correlation experiments with linewidths and sensitivity suitable to initiate sequential assignments. Amino‐acid‐selectively labeled NS4B can be readily obtained using cell‐free synthesis, opening the door to combinatorial labeling approaches which should enable structural studies. John Wiley and Sons Inc. 2020-02-20 2020-05-15 /pmc/articles/PMC7318649/ /pubmed/31850615 http://dx.doi.org/10.1002/cbic.201900765 Text en © 2019 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Full Papers
Jirasko, Vlastimil
Lakomek, Nils‐Alexander
Penzel, Susanne
Fogeron, Marie‐Laure
Bartenschlager, Ralf
Meier, Beat H.
Böckmann, Anja
Proton‐Detected Solid‐State NMR of the Cell‐Free Synthesized α‐Helical Transmembrane Protein NS4B from Hepatitis C Virus
title Proton‐Detected Solid‐State NMR of the Cell‐Free Synthesized α‐Helical Transmembrane Protein NS4B from Hepatitis C Virus
title_full Proton‐Detected Solid‐State NMR of the Cell‐Free Synthesized α‐Helical Transmembrane Protein NS4B from Hepatitis C Virus
title_fullStr Proton‐Detected Solid‐State NMR of the Cell‐Free Synthesized α‐Helical Transmembrane Protein NS4B from Hepatitis C Virus
title_full_unstemmed Proton‐Detected Solid‐State NMR of the Cell‐Free Synthesized α‐Helical Transmembrane Protein NS4B from Hepatitis C Virus
title_short Proton‐Detected Solid‐State NMR of the Cell‐Free Synthesized α‐Helical Transmembrane Protein NS4B from Hepatitis C Virus
title_sort proton‐detected solid‐state nmr of the cell‐free synthesized α‐helical transmembrane protein ns4b from hepatitis c virus
topic Full Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7318649/
https://www.ncbi.nlm.nih.gov/pubmed/31850615
http://dx.doi.org/10.1002/cbic.201900765
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