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The influence of bat ecology on viral diversity and reservoir status

Repeated emergence of zoonotic viruses from bat reservoirs into human populations demands predictive approaches to preemptively identify virus‐carrying bat species. Here, we use machine learning to examine drivers of viral diversity in bats, determine whether those drivers depend on viral genome typ...

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Detalles Bibliográficos
Autores principales: Guy, Cylita, Ratcliffe, John M., Mideo, Nicole
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7319232/
https://www.ncbi.nlm.nih.gov/pubmed/32607188
http://dx.doi.org/10.1002/ece3.6315
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author Guy, Cylita
Ratcliffe, John M.
Mideo, Nicole
author_facet Guy, Cylita
Ratcliffe, John M.
Mideo, Nicole
author_sort Guy, Cylita
collection PubMed
description Repeated emergence of zoonotic viruses from bat reservoirs into human populations demands predictive approaches to preemptively identify virus‐carrying bat species. Here, we use machine learning to examine drivers of viral diversity in bats, determine whether those drivers depend on viral genome type, and predict undetected viral carriers. Our results indicate that bat species with longer life spans, broad geographic distributions in the eastern hemisphere, and large group sizes carry more viruses overall. Life span was a stronger predictor of deoxyribonucleic acid viral diversity, while group size and family were more important for predicting ribonucleic acid viruses, potentially reflecting broad differences in infection duration. Importantly, our models predict 54 bat species as likely carriers of zoonotic viruses, despite not currently being considered reservoirs. Mapping these predictions as a proportion of local bat diversity, we identify global regions where efforts to reduce disease spillover into humans by identifying viral carriers may be most productive.
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spelling pubmed-73192322020-06-29 The influence of bat ecology on viral diversity and reservoir status Guy, Cylita Ratcliffe, John M. Mideo, Nicole Ecol Evol Original Research Repeated emergence of zoonotic viruses from bat reservoirs into human populations demands predictive approaches to preemptively identify virus‐carrying bat species. Here, we use machine learning to examine drivers of viral diversity in bats, determine whether those drivers depend on viral genome type, and predict undetected viral carriers. Our results indicate that bat species with longer life spans, broad geographic distributions in the eastern hemisphere, and large group sizes carry more viruses overall. Life span was a stronger predictor of deoxyribonucleic acid viral diversity, while group size and family were more important for predicting ribonucleic acid viruses, potentially reflecting broad differences in infection duration. Importantly, our models predict 54 bat species as likely carriers of zoonotic viruses, despite not currently being considered reservoirs. Mapping these predictions as a proportion of local bat diversity, we identify global regions where efforts to reduce disease spillover into humans by identifying viral carriers may be most productive. John Wiley and Sons Inc. 2020-05-08 /pmc/articles/PMC7319232/ /pubmed/32607188 http://dx.doi.org/10.1002/ece3.6315 Text en © 2020 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Guy, Cylita
Ratcliffe, John M.
Mideo, Nicole
The influence of bat ecology on viral diversity and reservoir status
title The influence of bat ecology on viral diversity and reservoir status
title_full The influence of bat ecology on viral diversity and reservoir status
title_fullStr The influence of bat ecology on viral diversity and reservoir status
title_full_unstemmed The influence of bat ecology on viral diversity and reservoir status
title_short The influence of bat ecology on viral diversity and reservoir status
title_sort influence of bat ecology on viral diversity and reservoir status
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7319232/
https://www.ncbi.nlm.nih.gov/pubmed/32607188
http://dx.doi.org/10.1002/ece3.6315
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