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Gastric cancer diagnosis using hyperspectral imaging with principal component analysis and spectral angle mapper

Significance: Hyperspectral imaging (HSI) is an emerging optical technique that has a double function of spectroscopy and imaging. Aim: Near-infrared hyperspectral imaging (NIR-HSI) (900 to 1700 nm) with the help of chemometrics was investigated for gastric cancer diagnosis. Approach: Mean spectra a...

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Autores principales: Liu, Ningliang, Guo, Yaxiong, Jiang, Houmin, Yi, Weisong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Society of Photo-Optical Instrumentation Engineers 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7320226/
https://www.ncbi.nlm.nih.gov/pubmed/32594664
http://dx.doi.org/10.1117/1.JBO.25.6.066005
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author Liu, Ningliang
Guo, Yaxiong
Jiang, Houmin
Yi, Weisong
author_facet Liu, Ningliang
Guo, Yaxiong
Jiang, Houmin
Yi, Weisong
author_sort Liu, Ningliang
collection PubMed
description Significance: Hyperspectral imaging (HSI) is an emerging optical technique that has a double function of spectroscopy and imaging. Aim: Near-infrared hyperspectral imaging (NIR-HSI) (900 to 1700 nm) with the help of chemometrics was investigated for gastric cancer diagnosis. Approach: Mean spectra and standard deviation of normal and cancerous pixels were extracted. Principal component analysis (PCA) was used to compress the dimension of hypercube data and select the optimal wavelengths. Moreover, spectral angle mapper (SAM) was utilized as chemometrics to discriminate gastric cancer from normal. Results: Major spectral difference of cancerous and normal gastric tissue was observed around 975, 1215, and 1450 nm by comparison. A total of six wavelengths (i.e., 975, 1075, 1215, 1275, 1390, and 1450 nm) were then selected as optimal wavelengths by PCA. The accuracy using SAM is up to 90% according to hematoxylin–eosin results. Conclusions: These results suggest that NIR-HSI has the potential as a cutting-edge optical diagnostic technique for gastric cancer diagnosis with suitable chemometrics.
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spelling pubmed-73202262020-06-29 Gastric cancer diagnosis using hyperspectral imaging with principal component analysis and spectral angle mapper Liu, Ningliang Guo, Yaxiong Jiang, Houmin Yi, Weisong J Biomed Opt Imaging Significance: Hyperspectral imaging (HSI) is an emerging optical technique that has a double function of spectroscopy and imaging. Aim: Near-infrared hyperspectral imaging (NIR-HSI) (900 to 1700 nm) with the help of chemometrics was investigated for gastric cancer diagnosis. Approach: Mean spectra and standard deviation of normal and cancerous pixels were extracted. Principal component analysis (PCA) was used to compress the dimension of hypercube data and select the optimal wavelengths. Moreover, spectral angle mapper (SAM) was utilized as chemometrics to discriminate gastric cancer from normal. Results: Major spectral difference of cancerous and normal gastric tissue was observed around 975, 1215, and 1450 nm by comparison. A total of six wavelengths (i.e., 975, 1075, 1215, 1275, 1390, and 1450 nm) were then selected as optimal wavelengths by PCA. The accuracy using SAM is up to 90% according to hematoxylin–eosin results. Conclusions: These results suggest that NIR-HSI has the potential as a cutting-edge optical diagnostic technique for gastric cancer diagnosis with suitable chemometrics. Society of Photo-Optical Instrumentation Engineers 2020-06-27 2020-06 /pmc/articles/PMC7320226/ /pubmed/32594664 http://dx.doi.org/10.1117/1.JBO.25.6.066005 Text en © 2020 The Authors https://creativecommons.org/licenses/by/4.0/ Published by SPIE under a Creative Commons Attribution 4.0 Unported License. Distribution or reproduction of this work in whole or in part requires full attribution of the original publication, including its DOI.
spellingShingle Imaging
Liu, Ningliang
Guo, Yaxiong
Jiang, Houmin
Yi, Weisong
Gastric cancer diagnosis using hyperspectral imaging with principal component analysis and spectral angle mapper
title Gastric cancer diagnosis using hyperspectral imaging with principal component analysis and spectral angle mapper
title_full Gastric cancer diagnosis using hyperspectral imaging with principal component analysis and spectral angle mapper
title_fullStr Gastric cancer diagnosis using hyperspectral imaging with principal component analysis and spectral angle mapper
title_full_unstemmed Gastric cancer diagnosis using hyperspectral imaging with principal component analysis and spectral angle mapper
title_short Gastric cancer diagnosis using hyperspectral imaging with principal component analysis and spectral angle mapper
title_sort gastric cancer diagnosis using hyperspectral imaging with principal component analysis and spectral angle mapper
topic Imaging
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7320226/
https://www.ncbi.nlm.nih.gov/pubmed/32594664
http://dx.doi.org/10.1117/1.JBO.25.6.066005
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AT yiweisong gastriccancerdiagnosisusinghyperspectralimagingwithprincipalcomponentanalysisandspectralanglemapper