Cargando…
HiChIP-Peaks: a HiChIP peak calling algorithm
MOTIVATION: HiChIP is a powerful tool to interrogate 3D chromatin organization. Current tools to analyse chromatin looping mechanisms using HiChIP data require the identification of loop anchors to work properly. However, current approaches to discover these anchors from HiChIP data are not satisfac...
Autores principales: | Shi, Chenfu, Rattray, Magnus, Orozco, Gisela |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7320601/ https://www.ncbi.nlm.nih.gov/pubmed/32207529 http://dx.doi.org/10.1093/bioinformatics/btaa202 |
Ejemplares similares
-
HiChIPdb: a comprehensive database of HiChIP regulatory interactions
por: Zeng, Wanwen, et al.
Publicado: (2022) -
Identification of significant chromatin contacts from HiChIP data by FitHiChIP
por: Bhattacharyya, Sourya, et al.
Publicado: (2019) -
HiChIP and Hi-C Protocol Optimized for Primary Murine T Cells
por: Zelenka, Tomas, et al.
Publicado: (2021) -
HPRep: Quantifying Reproducibility in HiChIP and PLAC-Seq Datasets
por: Rosen, Jonathan D., et al.
Publicado: (2021) -
HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data
por: Yan, Huihuang, et al.
Publicado: (2014)