gplas: a comprehensive tool for plasmid analysis using short-read graphs

SUMMARY: Plasmids can horizontally transmit genetic traits, enabling rapid bacterial adaptation to new environments and hosts. Short-read whole-genome sequencing data are often applied to large-scale bacterial comparative genomics projects but the reconstruction of plasmids from these data is facing...

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Detalles Bibliográficos
Autores principales: Arredondo-Alonso, Sergio, Bootsma, Martin, Hein, Yaïr, Rogers, Malbert R C, Corander, Jukka, Willems, Rob J L, Schürch, Anita C
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Applications Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7320608/
https://www.ncbi.nlm.nih.gov/pubmed/32271863
http://dx.doi.org/10.1093/bioinformatics/btaa233

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7320608/
https://www.ncbi.nlm.nih.gov/pubmed/32271863
http://dx.doi.org/10.1093/bioinformatics/btaa233

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