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Daily surveillance of COVID-19 using the prospective space-time scan statistic in the United States

The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) was first discovered in late 2019 in Wuhan City, China. The virus may cause novel coronavirus disease 2019 (COVID-19) in symptomatic individuals. Since December of 2019, there have been over 7,000,000 confirmed cases and over 400,000 c...

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Autores principales: Hohl, Alexander, Delmelle, Eric M., Desjardins, Michael R., Lan, Yu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Authors. Published by Elsevier Ltd. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7320856/
https://www.ncbi.nlm.nih.gov/pubmed/32807396
http://dx.doi.org/10.1016/j.sste.2020.100354
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author Hohl, Alexander
Delmelle, Eric M.
Desjardins, Michael R.
Lan, Yu
author_facet Hohl, Alexander
Delmelle, Eric M.
Desjardins, Michael R.
Lan, Yu
author_sort Hohl, Alexander
collection PubMed
description The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) was first discovered in late 2019 in Wuhan City, China. The virus may cause novel coronavirus disease 2019 (COVID-19) in symptomatic individuals. Since December of 2019, there have been over 7,000,000 confirmed cases and over 400,000 confirmed deaths worldwide. In the United States (U.S.), there have been over 2,000,000 confirmed cases and over 110,000 confirmed deaths. COVID-19 case data in the United States has been updated daily at the county level since the first case was reported in January of 2020. There currently lacks a study that showcases the novelty of daily COVID-19 surveillance using space-time cluster detection techniques. In this paper, we utilize a prospective Poisson space-time scan statistic to detect daily clusters of COVID-19 at the county level in the contiguous 48 U.S. and Washington D.C. As the pandemic progresses, we generally find an increase of smaller clusters of remarkably steady relative risk. Daily tracking of significant space-time clusters can facilitate decision-making and public health resource allocation by evaluating and visualizing the size, relative risk, and locations that are identified as COVID-19 hotspots.
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spelling pubmed-73208562020-06-29 Daily surveillance of COVID-19 using the prospective space-time scan statistic in the United States Hohl, Alexander Delmelle, Eric M. Desjardins, Michael R. Lan, Yu Spat Spatiotemporal Epidemiol Article The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) was first discovered in late 2019 in Wuhan City, China. The virus may cause novel coronavirus disease 2019 (COVID-19) in symptomatic individuals. Since December of 2019, there have been over 7,000,000 confirmed cases and over 400,000 confirmed deaths worldwide. In the United States (U.S.), there have been over 2,000,000 confirmed cases and over 110,000 confirmed deaths. COVID-19 case data in the United States has been updated daily at the county level since the first case was reported in January of 2020. There currently lacks a study that showcases the novelty of daily COVID-19 surveillance using space-time cluster detection techniques. In this paper, we utilize a prospective Poisson space-time scan statistic to detect daily clusters of COVID-19 at the county level in the contiguous 48 U.S. and Washington D.C. As the pandemic progresses, we generally find an increase of smaller clusters of remarkably steady relative risk. Daily tracking of significant space-time clusters can facilitate decision-making and public health resource allocation by evaluating and visualizing the size, relative risk, and locations that are identified as COVID-19 hotspots. The Authors. Published by Elsevier Ltd. 2020-08 2020-06-27 /pmc/articles/PMC7320856/ /pubmed/32807396 http://dx.doi.org/10.1016/j.sste.2020.100354 Text en © 2020 The Authors Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Hohl, Alexander
Delmelle, Eric M.
Desjardins, Michael R.
Lan, Yu
Daily surveillance of COVID-19 using the prospective space-time scan statistic in the United States
title Daily surveillance of COVID-19 using the prospective space-time scan statistic in the United States
title_full Daily surveillance of COVID-19 using the prospective space-time scan statistic in the United States
title_fullStr Daily surveillance of COVID-19 using the prospective space-time scan statistic in the United States
title_full_unstemmed Daily surveillance of COVID-19 using the prospective space-time scan statistic in the United States
title_short Daily surveillance of COVID-19 using the prospective space-time scan statistic in the United States
title_sort daily surveillance of covid-19 using the prospective space-time scan statistic in the united states
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7320856/
https://www.ncbi.nlm.nih.gov/pubmed/32807396
http://dx.doi.org/10.1016/j.sste.2020.100354
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